Schistocerca gregaria (desert locust): 126291714
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Entry
126291714 CDS
T08688
Name
(RefSeq) symplekin-like
KO
K06100
symplekin
Organism
sgre
Schistocerca gregaria (desert locust)
Pathway
sgre03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sgre00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126291714
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgre03021
]
126291714
03019 Messenger RNA biogenesis [BR:
sgre03019
]
126291714
Transcription machinery [BR:
sgre03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
126291714
Messenger RNA biogenesis [BR:
sgre03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
126291714
U7-dependent histone pre-mRNA processing factors
126291714
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
INTS1_R4
HEAT_2
Motif
Other DBs
NCBI-GeneID:
126291714
NCBI-ProteinID:
XP_049841327
LinkDB
All DBs
Position
9:142134358..142269502
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AA seq
1155 aa
AA seq
DB search
MSFQDIEGRDDTATEEDGSSYNKIVDWLNEASVTSETTTKTEILSKVQEIIVKKEPGLLN
SFLDEVIAFQSDRNSDVRRLVVGIIEEAVKKDSNVLPRVAPSLLLLLQDGSAQVQKRVVQ
AAAQVYRAALAWLADAHTSHEVLEATWNAITAIKAQIVYLVDCENDGIRTHAVKFLENVV
LLQTYPEPDGMVRRDDFSLEDVPMTLKIARRRKLEEEALMVFELLLNFHGSPHISSVNLM
TCMGSLTLIAKMRPQLFMGKVINAFEKLHQNLPPTLSKSQVSSVSKHLKIQLLNLLKQPS
SVEFHNNITALLTELGATHQEVMRAFPHPEELRRRQKRVAQMAPDLTPPSSKKSRLKVEY
EEEASEDDETVQVVNSEPTVEPVSTVPAPIILSEEVIDAAEKYILERLTPEVATQLVIQN
MMKLPDAVPPSFCAEYKPIPNAGSPVQIKMLCRMLAQLLCDAGMDPNGGHSKQPKMEIDD
GPLEKDVKPSLTSVMTEMMDKEKETQQAKASQQSGTVTVKVPKQRVRTLKLSEITKPLTT
ETRGNMMRAAVKRILKAERAAAVGGVMAVRSKIISTLAVTFNTDVRDVVLEFLLEDIRGR
IDLAFAWLYEEYSFMQGFSRLPPFIKREEAPEHRYDKLLCSLVKSLGDRPGQEGKDGSLL
FRLFLEAPLVTDEAVDILRRICGDRSRAAAGISLLQELVVRRPPRKIVFLNALLMHTAHE
EPEVRTRALDAVTQLYERGELRSIIEEYAMLYLSFLRLPSPPDVLFGPDRGRQKSTIPVI
ECRSTTGEVAATPWSEEAVRACLYLYLALLPLNEEMIHELARVYVQTAADMKRTILRLLE
QPVRGMGMDSPQLLRLVEECPKGAETLVTRVIHILTEKTPPSAELVAHVRELYHTRVSDV
RFLIPVLNGLSKKEVIAALPKLIKLNPVVVKEVFNRLLGTHTESPSHMSPLTPAELLIAL
HSIDPSKCELKTVIKATSLCFSEKQAYSQEVLAVVLQHLMEMTPLPTLLMRTVIQSLSLY
PRLIGFVMNILQRLILKQVWKQKKVWEGFIKCCQRTKPQSFQVLLQLPPAQLSDVFQVSP
DLRQPLLAHVTAFTDNQRAHIPKSIMDVLLGSKRTSNDEYDVDTEARSPSDLTIDIKEEP
EDYNSRSEPAPPGLE
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttcaagatattgagggaagagatgatactgcgacagaagaagatgggtcatct
tataataagattgttgattggctaaatgaggcgtctgtgacgtcagagaccactacaaaa
acagaaatactgtcgaaagtacaggaaattatagtaaaaaaagagccaggcttactgaac
agcttcctggacgaggttatcgccttccaaagcgatcggaatagtgatgttagaagactc
gtcgttggaattatagaggaagcagtgaagaaggattcgaatgtgctgccacgtgtggcg
ccgagcctgttgttgctgctgcaggacgggagcgctcaggtccagaagcgcgtggtgcag
gcggccgcacaggtgtaccgggcggccctagcttggctcgcagatgcccataccagccac
gaggtgctcgaagccacctggaacgcaataacagcaattaaggcgcagattgtttacctt
gtggactgcgagaatgatggtattcgtacgcatgctgtgaagttcctggagaatgttgtc
ctcctgcagacatatccagaacctgatggcatggtgcgtagagatgacttctctctagaa
gatgtaccaatgacacttaaaatagcaagaagaagaaaactggaggaagaggccttgatg
gttttcgagctgctactgaacttccacggatcccctcacatcagcagtgttaacctcatg
acgtgcatggggtccttgacactcatagcaaagatgcgaccacaacttttcatggggaaa
gtcatcaatgcctttgagaagttgcaccaaaaccttccaccgacattgtcaaagtcgcaa
gttagttcggtgagcaagcacctgaaaatccagttactgaatctactgaaacagccgtct
tctgtagagttccacaacaacattactgccttgctgactgaactgggtgctactcatcag
gaggtgatgcgggcattcccacacccagaggaactgcggcgccgacagaaaagagtggca
cagatggccccagatttgaccccaccgtccagcaagaaatctcgcctcaaagtcgaatac
gaggaagaggcttcagaagacgacgagactgtacaggttgtgaactcagaacccacagtg
gaacctgtctctacagtgcctgctccaattattttgtcagaagaagtcatagatgctgcg
gagaaatatatcctagagcgtctgacaccagaagttgccacgcagctcgtcatccaaaat
atgatgaagctgcccgatgctgttccgccatcattctgtgccgagtacaaacctatcccg
aatgcaggctcacctgtgcaaatcaaaatgctgtgccgcatgctcgcccagctgctgtgc
gacgcaggaatggatcccaatgggggccatagtaaacagcctaagatggaaatagatgat
ggtcccctagaaaaagatgtgaagccatctctcacctcggtgatgacagagatgatggac
aaggaaaaggaaacgcagcaggcaaaagcttctcagcagtctggaacggttactgtgaag
gttccgaagcagcgtgttcgcacactgaagctgtcggaaattacaaaacctctcacgacc
gagacccgtggaaacatgatgcgggctgccgtgaagcgcattctgaaggcggaacgtgct
gcagctgtgggcggagttatggctgtccgaagcaaaataatctccacacttgctgtgact
tttaacactgatgttagagatgttgtactggaattcctcctcgaagacatcagaggtagg
atagacctggcatttgcgtggctttatgaagagtacagcttcatgcagggcttcagccgc
ctgccaccatttataaaacgtgaggaggcacccgagcatcggtacgacaagcttttgtgt
tctctggtgaagtcacttggtgatcgcccaggccaggaaggcaaagatggctcgttgtta
ttccggctgttcctcgaggctccactggtgacggatgaggcagtagacattctgcggagg
atctgcggtgaccggagccgcgccgcggccggcatttccctgctccaggagctggtcgtg
cgtcggcctccgaggaaaattgtcttcctgaatgctctcctcatgcacacagcccacgag
gagccagaggttcgaacgagggctctggatgccgttacgcagctctacgagcgtggggaa
ctgcgatcaatcatcgaggagtacgcaatgctgtacttgagcttcctccgcctgccgagc
ccacctgatgtgctgttcggaccggaccgcggccgacagaagtcgacaatacctgtaata
gagtgccgaagtacgactggtgaagttgcagcaactccctggagcgaggaggccgtgcgt
gcctgcctctacctgtacctcgcactgctgccactgaatgaggagatgattcacgaattg
gccagagtgtacgtgcagacggcagcggacatgaagcgaaccatcctgcgcctgctggag
cagccggtcagagggatgggcatggactccccgcagctgctccgcctggtggaggagtgc
cccaagggtgccgagacgctcgtcacccgcgtcatccacatcctcactgaaaagacaccg
ccaagtgcagagcttgtggctcatgttcgagaactgtaccacacccgcgtgtcagacgtg
agattcctgattcctgttctgaatggtctcagcaagaaggaagtgatcgctgctctgccc
aagctcatcaagctcaaccctgttgttgtcaaggaggttttcaacaggttgctcggcaca
catacggaatcgcctagtcacatgtctccacttacaccagctgaattgctcatagctctg
cacagcatagatccttcaaagtgtgaactaaagactgtgataaaggctacctcattgtgc
ttctcagagaagcaagcctacagccaagaagttctggcagtagtactgcagcatcttatg
gaaatgactccacttcccacgttgctgatgaggactgtcatacagtcactgtccctgtat
cctcgtctcattggtttcgttatgaacatcctgcagagactaatcctaaagcaggtatgg
aaacagaagaaagtgtgggagggcttcataaagtgctgccagcgaacaaagccacagagc
ttccaagtcctactgcagctaccacccgcacagctgagcgacgttttccaagtttcaccc
gacttgagacaacctctgcttgcacatgtcacagccttcaccgataatcagcgtgctcac
atccccaaatccattatggatgttctcttgggcagtaagcggacatcaaacgatgagtat
gacgtcgatacagaagctaggtcaccctcagacttgacaattgacatcaaagaagagcca
gaggactacaacagcaggtcagaaccggcaccccctgggttggaatag
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