Schistocerca gregaria (desert locust): 126295126
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Entry
126295126 CDS
T08688
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33-like isoform X1
KO
K15542
polyadenylation factor subunit 2
Organism
sgre
Schistocerca gregaria (desert locust)
Pathway
sgre03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sgre00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126295126
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgre03019
]
126295126
Messenger RNA biogenesis [BR:
sgre03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
126295126
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
WD40
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_Gbeta
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
ANAPC4_WD40
ASA1
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
DSE1_N
Beta-prop_WDR19_1st
Beta-prop_EIPR1
CFAP251_N
WD40_RFWD3
Beta-prop_WDR75_1st
eIF2A
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
Beta-prop_SCAP
Beta-prop_Vps41
Beta-prop_NOL10_N
Beta-prop_DCAF4
Beta-prop_HPS5
PEP5_VPS11_N
Beta-prop_WDR11_2nd
Beta-prop_WDR41
Beta-prop_SPT8
PAC11
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
126295126
NCBI-ProteinID:
XP_049843353
LinkDB
All DBs
Position
11:complement(111872071..112027926)
Genome browser
AA seq
1068 aa
AA seq
DB search
MLQSVQFSQPPPPMPNLSIPPPNFPPPQQPPPQQQQLRYGTDPRGVHRGHFFQPFRPYTR
PGPVGADSEFDGKRLRKSVMRKTVDYNSAIIKMLESRVWQRDFRDRRSLQPDVLYYPDLQ
PPPAYADNPINSVTTRFVKTATNKMRCPIFCMAWTPEGRRLVTGASSGEFTLWNGLTFNF
ETILQAHDSPVRTMVWSHNDVWMVTGDHAGYVKYWQSNMNNVKMFQAHKEAIRGLSFSPT
DHKFVTCSDDGTLRIWDFMRCHEERILRGHGADVKCVHWHPQKGLIISGSKDNQQPVKLW
DPKTGQSLATLHAHKSTVMDIKWNANGNWLVTASRDHLLKLFDLRNLSTEVQTFRGHKKE
ASSVAWHPYHEGLFCSGGSDGAILFWHVGADKEVGGIEQAHDSIVWTLAWHPLGHILCSG
SNDHTSKFWTRNRPGDQMRDKYNLNTLPAGLTGVDDQDVDEPAVIPGMGPEDKVETTDGT
TPAPAAASQIPGLDFEGVEDRHRQLHKKVPYSKPIPRNFQAQWNETKLNHEDGMADEDSD
GEEGWRNRRGGSAKDPISEVISQIMETNPPPGVVPLSQLQPQAILIYGKLIPVEGNPVLL
EAIQQGGEALRRLIDSGEIEELQDVMPHNDDSPTLGGNARGSNTVSAAVVTPRAHPRKPE
YREPVADRSVNDSDRDETSNDSYRMDTDPHNNTRHHDPLPMPGTRQRRTRFSDLPAPDLS
NDDSQQQMQRPQDHEIEELPHQDKDMRQTPLSHPHQHQIPYSTSAPMQNMSDQDMRFPAG
PPTLLPTPGGGRDVDLRSTDLYSDLPPPLMSSPMSGMLSTTGDSDLRRMPLLPSTGLPPV
RGMDEDLRVPPHADRYRDVGPVEDHDMRQQWAPGGGGGPAPVPGGPRKRRWGADNGSDDG
RPSTPQPYLQRSSSGSVRTYDRDQRGRSPILPDYEPYGRAEYRRGGIGSGKLPPSRYRDE
GYDGYPGSPSEGGEDVGPEGDAGHDWPPPTGGPRVAGGGLLPHPYPRPRDSTSSGADLGS
GGYRGRSPNSYRGDTRGGGRGGGRGGRYSSRGRGSMRGGAGKRGGGGF
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgttgcaaagtgtgcagtttagtcaacctcctcccccaatgccgaatctctccatacca
ccccctaactttccaccgccccagcaacccccgccgcagcagcaacagcttcgttatgga
accgatccaagaggagtacacaggggacattttttccagcctttccgtccgtacaccaga
ccaggccctgtaggtgcagatagtgagtttgatggcaaacgattgcgcaaatcggttatg
agaaagacagttgactacaactcagcaataattaaaatgttggagtctcgggtgtggcaa
cgtgatttccgagacagacggtcgctgcagccggatgtgctgtactacccagacctccag
ccgcccccagcgtatgcagataatcccattaactcagtcaccacacgttttgtcaagact
gctaccaataaaatgaggtgtcccatattctgcatggcgtggacaccggaggggcgcaga
ctggtcacaggagcgtccagtggagagttcacattgtggaatggactcacgttcaacttt
gagacaatattgcaggcccacgacagcccagtgcggacgatggtgtggtcgcacaatgac
gtgtggatggtgactggggaccacgcaggctacgtcaagtactggcagagcaacatgaac
aatgtgaaaatgttccaggcgcacaaggaagcgattcgtggcctcagcttcagtccgacg
gaccacaagtttgtgacttgctctgacgatggcaccctcaggatatgggatttcatgcgc
tgccatgaagagaggatactccgagggcatggagctgatgtgaagtgtgttcactggcat
ccccagaaaggtctgatcatatcaggcagtaaagacaaccagcagccagtcaaattgtgg
gatcccaaaacaggacagtctctggcaacattgcacgctcacaagagcactgtgatggac
atcaagtggaatgccaatggcaactggttagtgactgcatcgcgagatcacttgctgaaa
ctattcgacctgcggaacttgtcaacggaggtgcagaccttccgcgggcacaaaaaggag
gcatcgtctgtggcctggcatccataccacgagggcctcttctgcagtgggggcagtgac
ggagctatcctcttctggcatgtcggggcagacaaggaggtgggcggtatcgagcaggct
cacgacagcatcgtctggacactggcgtggcatcccctcgggcacattctctgctcgggc
tcgaacgaccacaccagcaaattctggacccgtaaccgtccaggagaccagatgcgagac
aagtacaacctcaacacactgccagctgggctgacaggtgtcgacgaccaggatgtcgat
gagccagcagtgattcctggcatgggtccagaggacaaggtggagacgaccgatgggaca
acgccagctcctgcggccgcttctcagatccctggcctcgactttgagggtgtcgaggac
aggcatcggcagctgcacaaaaaggttccatactcaaagccaattccacgcaacttccaa
gcacagtggaatgagactaaactcaatcatgaagatgggatggcagacgaagacagtgac
ggcgaagagggctggcgaaacaggcggggaggatccgccaaggaccccatcagcgaggtc
atctcgcagatcatggagacgaaccccccacctggggtggtgcccctgtcacagctgcag
ccgcaggctatcctcatctacggcaaactcattcccgtcgaaggtaaccctgtgctgttg
gaagcgatccagcaaggtggcgaagccctccgcaggctgatcgactccggcgagatcgag
gagctacaggacgtgatgccgcacaacgacgattcccccacactgggcggcaatgcacgc
gggtccaacactgtgtctgcggcagtcgtgacgcctcgcgcgcacccgcggaagcccgag
tacagggagcccgtcgcagaccggtcggttaacgattccgaccgagatgagacaagcaat
gactcctatcgtatggacaccgaccctcacaacaatacgaggcaccacgatccgctaccg
atgccgggcacgcggcagcggcggactcgctttagcgacctgccggcaccggacctgagc
aacgacgacagccagcagcagatgcaacggcctcaggaccacgagatcgaggagttgccg
caccaggacaaggatatgcggcagacgccactttcgcacccacaccagcaccagattcct
tactccacttcggcaccaatgcagaatatgtccgatcaggacatgcggttcccagccggt
cccccaaccctgctgcccacgccgggcggcggtcgggatgttgacctgcgcagcaccgac
ctgtacagcgacttgccgcctccgctgatgagctcgccgatgtccggcatgttgtcaacg
acaggagatagtgatctgcgccgcatgccactgctgccgagcacagggctgccaccggtt
cgcgggatggacgaggacttgcgagtcccgccccacgccgacagatatcgagacgtcggc
ccggtggaggaccacgacatgaggcagcagtgggctcccggtgggggtgggggacccgca
cctgtccctgggggcccacggaagaggcgctggggagcggacaatggctcggacgatgga
cgaccttctactccacagccgtacctgcagcgtagcagcagcggatcggtgcggacctac
gaccgcgaccagcgaggaaggagccccattctgcccgactacgagccttacggccgtgcg
gaatatcggcgtggtgggataggctccggcaagctaccaccatccaggtacagagacgag
ggctacgacggctatccagggtcaccctctgaaggcggcgaggacgtcggcccggaagga
gacgccggtcacgactggccaccccccactggcggacccagggtggcaggaggtggcctc
ctcccacacccgtacccacgcccgagggacagcaccagcagcggggccgacctcggatcc
ggtggctaccggggccgatctcctaacagctaccgcggtgacacgagagggggcgggcgg
ggtggtggccgcggaggtcggtattcatccagggggcgggggtcgatgaggggtggagcc
gggaagaggggaggtggaggcttctga
DBGET
integrated database retrieval system
