Schistocerca gregaria (desert locust): 126318616
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Entry
126318616 CDS
T08688
Name
(RefSeq) DNA-directed RNA polymerase II subunit rpb2-like
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
sgre
Schistocerca gregaria (desert locust)
Pathway
sgre03020
RNA polymerase
sgre03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sgre00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
126318616
09124 Replication and repair
03420 Nucleotide excision repair
126318616
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgre03021
]
126318616
03400 DNA repair and recombination proteins [BR:
sgre03400
]
126318616
Enzymes [BR:
sgre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
126318616
Transcription machinery [BR:
sgre03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
126318616
DNA repair and recombination proteins [BR:
sgre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
126318616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Cation_efflux
Motif
Other DBs
NCBI-GeneID:
126318616
NCBI-ProteinID:
XP_049849385
LinkDB
All DBs
Position
Unknown
AA seq
1048 aa
AA seq
DB search
MVPIGRIPTMVRSRICNLNKTGAGNLSSAAECDYDEGGYFIVNGSEKVLIAQEKMSNNHI
YVFKQPKESKYTWIAEVRSVVEGSFRPPSATYVRLLQASKTHDATIQATLTSSTRDDVPI
IIVFRAFGFESDKDILEHICYDLEDERMVELIKPSLVEGREIRTRDTALEWIGTTNTTFQ
SISQSRLRFAEEVLQKEVLPHVSQHEGGNTQKAFYFGYMVHRLLQAALERRPPDDRDHYG
NKRMELAGALMEGLFCQLFVNMVKQLKKKFLAVVDNEKTRVFDFKHYISGEIITTGLNYS
LSTGNWGAGRRGAKTKSGVSQVLNRLTFLSTLSHLRRLNTPIGSDSKLAKPRQLHNTHWG
MVCPAETPEGHQCGLVKNLSLMALISVAYQGNEIEPMLRSANLLDSLAQVAPSQILKSTK
IFLDGAWLGMSSTAPEFVEYLKSWRRQRFEASQISITHDIEHREVHIQTDPGRCCRPLFV
VHDNFLQIKKSHIQELQDPHSGVNWNTILEAGLVDIVDTAEEETLMIAMVPADLQVAREA
YIKCEGFSQSFTHCEIHPSMILGVVASVIPFPDHNQSPRNTYQSAMGKQALGVYATNFNL
RMDSLAHVLWYPQKPLARPHAVKYLKFRDLPAGTNVVVAIACYSGYNQEDSVMLNQSSID
RGLFRSVFYRTYREEESCHEAHDSKIVETFEKPTPGEVGRISNKNYSRLDEDGIVSPGTP
VFGEDIIIGRTRTVPDGIRVGDKEYFKEDSSKPSRPSESGIVDQVMISTSAEGNRFVKVR
IRSIRTPTIGDKFSSRHGQKGTCGMLYRQEDMPFNRDGICPDLIMNPHAIPSRMTIGHMI
ECLLSKLAAVSGEEGDATPFTDVNVEQISQRLHSYGYQPRGNEVVYHGHTGRRMEAQLFM
GPMYYQRLKHLVEDKMFSRARGRTQILTHQPAEGRSRGGGLRFGEMERDVMIAHGSSQFL
KERLLYQSDIYRLHICEVCGLIAITTLESNRLYCKNCKLSSRIVQVLLPYACKLLFQELM
SMNIAPRISTVPPPPAGAEIDMTKYDYD
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atggtgccgattggtcggattccgactatggttaggtctcgaatttgcaacttgaacaag
acgggggctgggaacttgagttctgccgcggagtgcgattacgacgagggtggctacttc
atcgtcaacggcagcgagaaggtgttgattgctcaggagaagatgtctaacaaccacatt
tacgtgttcaagcagcccaaggagtccaagtacacttggatagcggaggttcggtcggtg
gtggaggggtcttttcgtcccccgtccgcgacgtacgtgcgcttgctgcaggcgtcgaag
acgcacgacgcgaccatccaggcgacgctgacgtcgtctacgcgcgacgacgtgcccatc
atcatagtgtttcgagcgtttgggttcgagagtgacaaggacattttggagcacatatgt
tacgacctggaggacgagcgcatggttgagctgatcaagccctccctggtggagggcaga
gagattcggacgcgggacaccgcgttggagtggattgggaccaccaacacgacgtttcag
agcattagtcagagtcggctgaggtttgcggaggaggttttgcagaaggaggttctcccc
cacgtttctcagcacgagggcggaaatacgcagaaggcgttttattttggctacatggtg
cacaggctgttgcaggccgcgctggagaggaggccgcccgacgacagggaccattatggg
aacaagcgcatggagttggcgggcgcgctcatggaggggcttttttgccagctgttcgtc
aacatggtgaagcagttgaagaagaagtttctcgcggtggtggacaacgagaagacgcgc
gtgtttgacttcaaacactacattagcggcgagatcattacgactggactcaattactcc
ctttccaccggcaactggggcgccggtcggaggggcgccaagaccaagagtggcgtttcg
caggttttgaaccgactgacgtttctctcgaccctgtctcacctgcggcgcctgaacacg
ccgattggcagcgactcgaagctcgcgaagcctcgccagctgcacaacacgcattggggg
atggtttgtcccgcggagacgccggagggacaccaatgcgggcttgtgaagaacttgtct
cttatggcgcttatttcggttgcgtatcaagggaacgagatagagccgatgctgcgctcg
gcgaatttgctggattccctggcgcaggtcgcgccttctcagattctgaagtcgaccaag
attttccttgacggtgcctggcttggcatgagcagcacggcgccggagttcgtcgagtac
ctgaagtcctggcgtcgccagcgcttcgaggcgagtcagatttcgattacccacgacatc
gagcaccgcgaggtccacatacagacggatccggggcgctgctgcaggccgctgttcgtg
gtgcacgacaatttcttgcaaataaaaaaaagccacattcaagagcttcaggatccccat
tcgggcgtcaactggaacaccatcctggaggccggcctggttgacatcgtcgacacggcc
gaggaggagacgctcatgatagcgatggtgccggctgatctccaagttgcgcgagaggct
tacataaagtgcgaagggttcagtcagtctttcacgcactgcgaaatccatccttctatg
atcctcggcgtggtcgccagcgtgattccgtttccagaccacaaccagtctcccaggaac
acctaccagagcgccatgggcaagcaggcgctcggagtctacgccaccaacttcaacctg
cgcatggattctttggctcacgttttgtggtacccccagaagcccttggcgcgtccgcac
gcggtgaagtacctgaagtttcgagacctcccggccggtaccaacgtggtcgtggcgatc
gcgtgttactccgggtacaaccaggaggattccgtgatgctcaaccagtccagcattgac
aggggcctcttccggtccgtcttctatcgcacgtaccgcgaggaggagtcctgccacgag
gcccacgacagcaagatcgtggagaccttcgagaagccgactcccggcgaggtcggccgc
atctccaacaagaactactcgcgactcgacgaggacggcatcgtgtcgccgggcacgccg
gtcttcggcgaggacatcatcataggcaggacgcgcaccgttccggacggaatccgagtg
ggagacaaggagtacttcaaggaggactcgtccaagccctctcgcccgagcgagtccggg
atcgtcgaccaggtcatgatcagcacgtccgccgagggaaaccggttcgtcaaggtccgc
attcgaagcatacgcacgcccaccatcggcgacaaattctcctctcgacacgggcaaaaa
ggcacatgcggcatgctctatcgccaagaagacatgccgttcaaccgagacggcatctgc
ccggacctgatcatgaacccgcacgccattccgtcccgcatgactatcgggcacatgatc
gagtgtctcctcagcaagctcgccgccgtcagcggagaagagggcgacgccacgcccttc
accgacgtcaacgtcgagcaaatctctcaacgcctccactcctacggataccaacctcgc
ggcaacgaagtcgtctaccacggccacaccggcaggcgcatggaggcccagctcttcatg
gggcccatgtactaccaacggctgaagcacctcgtcgaggacaaaatgttttcacgagct
cgcggaaggacccaaattctcacccaccaacccgccgaagggcgatccagaggcggcggc
cttcggttcggggaaatggaacgcgacgtcatgatcgcccacggctcctcccaattcctg
aaagagcgcctactttatcaaagcgacatctatcgcctccacatctgtgaggtgtgcgga
ctcatcgccatcaccacgctcgaatctaaccggttgtactgcaaaaactgcaaactctca
tccagaatcgtacaagtcctccttccctacgcctgcaagctcctcttccaggagctcatg
tccatgaacatcgccccgcgcatcagcaccgttcccccgcctcccgctggcgccgaaata
gacatgaccaagtacgactacgactaa
DBGET
integrated database retrieval system
