Schistocerca gregaria (desert locust): 126322426
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Entry
126322426 CDS
T08688
Name
(RefSeq) uncharacterized protein LOC126322426
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
sgre
Schistocerca gregaria (desert locust)
Pathway
sgre03013
Nucleocytoplasmic transport
sgre03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sgre00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126322426
03015 mRNA surveillance pathway
126322426
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgre03019
]
126322426
Enzymes [BR:
sgre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
126322426
5.6.2.5 RNA 5'-3' helicase
126322426
Messenger RNA biogenesis [BR:
sgre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
126322426
mRNA cycle factors
Common to processing body (P body) and stress granule
126322426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
UPF1_Zn_bind
AAA_11
UPF1_1B_dom
AAA_30
AAA_19
UvrD-helicase
ResIII
AAA_16
NPHP3_N
nSTAND3
DEAD
PhoH
SLFN-g3_helicase
Helicase_RecD
POX
AAA_10
AAA_22
AAA
ATPase
Motif
Other DBs
NCBI-GeneID:
126322426
NCBI-ProteinID:
XP_049850318
LinkDB
All DBs
Position
Unknown
AA seq
1312 aa
AA seq
DB search
MMAAVRKMKIVTALGAIAEIVRKIHAFQILTDSLSLSLSFIYSRFHQDHFLCWCVTFDST
LYRLMSELQVKMPYTAVSDGLVQPSSPSVDDHPSMFCESSYDSLSLSAYLDSTIGYQDDI
FDKKVHEDNKLDAATLDADHKNEQLIRELPEYACSYCGIHSTACVVKCNFPTCKKWFCNS
KAGTNTASHIITHLVRNKHKTVQLHQDSPLRDVQLECYQCGCRNVFVLGYTPAKTESFVV
ILCRDHCTRSLVSSANAADSAAEKSLVARDTVSCGKASSDTEWNMSLWQPLIDNRAFLPW
LVKTPTEAEIASAMKINIQQTVRLEELWKQDPNAKLDVILNSTPASIDAEPNSVMMQYTD
AYQYQSIFGPLVKLEADYDKRMKESQSQESITVRWEVAMNQRHIAWFTFPRADADLRLVP
GDELRLKLPGENVPGGRKPWEAQGHVIKVIGDEIGIKLHYTPKSSLKSNGSQDAHASASS
QSPPVNVTSGFCVEFVWKSTSFDRMQAAMHMLKSQDNISTYLYKKLLGQEVEEESLRNCN
LKRVEEVKIPNLPQLNPSQLEAVKAVVSSPLSLIQGPPGTGKTVTSAAVVYHLVKQGVGQ
VLVCSPSNVAVDHLTERIHLTGLRVVRLAAKSREAVLSPVDHLTLHSQVRQLLDEIRNQV
QNSSDHAGDETKKDVGKSDQQQSGTESSTTRSKKDKSSSSSASVTPHYDTDKIELARLQK
MRDELGELPAHDEHRYKQLKREVEMAILRAAQVICTTCVGAGDLRLKKFKFAQVLIDEST
QSTEPECLIPIVSGARQLVLVGDHCQLGPVIMCRQSARAGLSLSLFERLVRLGNKPIRLN
IQYRMHPCLSAWPSNTFYEGSLQNGVTVKQRTLKSVKFPWPNKDQTKFFYASFGQEEISA
SGTSFLNRSEANICERLLMHFLKAGVKPQQIGVITPYEGQRAYLVNCFKRILPVETVEHI
EVASVDSFQGREKDFIIFSCVRSNESASLSHPSLGSNNTNFSGGQNHYHNSGNGNRYSSN
NSVINNYPSIGFLNDPRRLNVALTRARFGLVLLGNPRVLCKQALWNNLLWHYAECNALVE
GSLENLRPTTFKLLQIKKPYFFMPEEYYPPRIPVHMTPSISYPGMKPSQYTGGHPNQPPH
PDSSIYSRSWQPVPEYASQFGSRLSHPSTCSYLDNTASRVPNVNHYSPSYDRQLGDAFGT
SMSLYQPFSSSTAAPQLLAYQSSMIQQQPDPYYHGKFTHVNPYNKELQPSNFSLLSQTLP
FYSQGNSYLTQTPSESIQPQPIIQEDQGQGKDSNSEKKKPEPVDTASKNARK
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggctgtccggaagatgaaaatagtcaccgcacttggtgccatagcagaaatt
gttcggaaaatacacgcatttcaaattctaactgattctctttcattgagtctctcattt
atctactcacggttccaccaagaccattttttgtgttggtgtgtaacttttgactcaact
ctttataggctgatgagtgagttgcaagtaaagatgccgtacacggcggtttcagatggc
ttggttcagccttcttctccttccgtcgacgaccatccttctatgttttgcgagtcgtca
tacgattcgctttctctgtctgcctaccttgactctactatcggataccaggatgacatc
tttgataaaaaagtccatgaagacaacaagttggacgcagctaccttagacgcggatcat
aaaaacgagcagctcatccgggagttgcctgaatacgcatgttcatattgtggaattcac
tcaaccgcttgcgtggttaagtgcaactttcctacgtgcaaaaaatggttttgcaatagc
aaggcgggcacgaatacagctagtcacattattacacatcttgtacgaaacaaacacaaa
acggttcaacttcaccaggactcgccgctgagagacgttcagttggaatgttaccagtgc
gggtgccgcaacgtatttgtgcttggctacacgccagctaagactgagagttttgtggtg
attttgtgtcgtgaccactgtactcggtcattggtctcttctgcgaacgcggccgactcg
gctgctgaaaagagcctcgtggcgcgtgacaccgtttcttgcggcaaggcgagttcagac
accgaatggaacatgtcactttggcagcctctaattgacaatcgcgcctttctgccttgg
cttgtgaaaacgccgaccgaggccgagatcgcgagcgccatgaagattaacattcaacag
actgtgcgtttggaggagctctggaagcaagatcccaacgccaagttggacgtgatattg
aactctacgcccgccagcatagacgcggagccgaacagcgtgatgatgcagtacaccgac
gcgtatcagtaccagagcatttttggcccgttggtgaagctagaggcagattacgacaag
aggatgaaggagtcgcagagtcaagaaagcatcacggtgcgatgggaggtggcgatgaat
caacgccatattgcgtggtttacgtttcctcgagcggatgccgaccttcggctggtccct
ggagacgagttacgcctcaaactgccgggggagaatgtaccgggtggtaggaagccatgg
gaggcgcaggggcacgtcataaaggttatcggagacgagattggcataaagctgcattac
acgcccaagtcctcgttgaaatcgaatggttctcaggatgcgcacgcgtctgcgtcttca
cagtcgcctccagtgaacgtgacttccggcttttgtgtggagtttgtttggaagagcaca
tctttcgaccgcatgcaagcggccatgcacatgctgaagtcgcaggataacatatctacc
tatttgtacaagaaactgttgggtcaagaggttgaagaagagagcttaaggaattgcaac
ttgaagagagtcgaggaggtgaaaattcccaacttaccgcagctgaacccgagtcagttg
gaagccgtcaaggcggtcgtatcttctccgttgtctctgatacagggtcctccggggact
gggaagaccgtgacttccgccgctgtggtgtaccacttggtgaagcagggagtgggtcag
gttttggtgtgctctccttcgaacgtggccgtggaccacctgacagagaggattcatctg
accgggctgagagtggtgcgtctcgcggctaagtcgagggaggccgttttgtctccggtc
gatcacttgacgttgcacagtcaagtgcgccagcttttggacgaaattcgaaatcaggta
caaaattcgtcggaccacgcaggcgacgagacgaaaaaggacgttggcaagagcgaccag
cagcagtcaggcactgagtcgtcgacgaccaggtccaagaaggacaagtcttcgtcatct
tctgcttctgtcacgccgcactacgacactgataaaattgagctggctcgtttacagaaa
atgcgagacgagctcggggagctgccagcgcacgatgaacaccggtacaagcagctgaag
cgcgaggttgagatggccattttgcgcgcagcgcaagtgatctgtacgacgtgcgttggt
gctggcgatttacgtttgaaaaagtttaaatttgctcaagtgctaattgacgagtcgact
caaagtaccgagccagaatgcttgattcccattgtttctggcgccaggcagctggttttg
gtcggtgaccactgccagctcggtcctgtcattatgtgtcgtcagtctgcccgagccggg
ctgtctctgtctctgttcgagcgtctggtacgtttggggaacaagcccattcgtctgaac
attcagtaccgcatgcacccttgcttgagtgcttggcccagcaacaccttctacgagggc
tctctgcagaacggcgtcacagtgaagcagcgtacacttaaatctgtcaagtttccgtgg
cccaacaaagaccagacgaagttcttctacgccagctttggccaagaggagatttctgct
tccgggacgtcttttttgaaccgcagtgaggccaacatttgcgagcggctacttatgcac
tttttgaaggccggcgtgaagcctcagcagattggtgtcatcacgccctacgaggggcaa
cgcgcctacttggtgaattgcttcaagcgcattttgccagttgagaccgttgaacacatt
gaagtcgcctctgtcgactcctttcaaggaagagaaaaagactttatcattttcagctgc
gtccggtcaaacgagtctgcgagcctgagccaccctagcctcggctccaacaacacaaat
ttttcaggcgggcaaaatcattaccacaattctggaaatggcaacaggtattcttccaac
aattcggtcatcaacaactatcccagcattggctttctgaatgatccacgtcgcctcaac
gtagctctgacccgtgctcgattcggcctcgtactccttgggaatccccgcgttctatgt
aagcaggctctctggaacaatctactctggcactatgcagagtgcaacgcgctcgttgag
ggctccctagaaaacctcagaccaaccacctttaaacttctacaaatcaaaaaaccctac
tttttcatgcccgaggaatactaccctcctcgcattcctgttcacatgactccgtcgatc
tcctatcctggtatgaaaccttctcaatacaccggcggccacccgaaccagccacctcat
ccggactcttccatctactctcgctcgtggcaacctgtcccggagtatgcctcccaattt
ggctctcgactctcccacccatccacctgctcgtacctggacaacaccgcctcccgcgta
cccaacgtcaaccactattcaccatcctacgaccgacaactcggggacgccttcggcacg
tccatgtcactttaccagcccttttcgtcatccaccgccgcgccacagctactggcgtat
caaagctctatgatccagcagcagcccgacccatactaccatggcaagttcactcacgta
aatccgtacaacaaggaacttcaaccttctaacttctctctcctctctcagacactgccc
ttctattctcagggcaactcctacctaactcagacgccgtccgagtccattcagccacaa
cctatcatccaagaagatcagggccaaggcaaagactccaacagtgagaaaaaaaaacct
gaacctgtcgacactgcttcaaaaaatgcaagaaaatga
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