Schistocerca gregaria (desert locust): 126334542
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Entry
126334542 CDS
T08688
Name
(RefSeq) poly(A)-specific ribonuclease PARN-like
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
sgre
Schistocerca gregaria (desert locust)
Pathway
sgre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sgre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126334542
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgre03019
]
126334542
Enzymes [BR:
sgre01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
126334542
Messenger RNA biogenesis [BR:
sgre03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
126334542
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CAF1
RNA_bind
RRM_Thc1
RRM_NFXL1
Motif
Other DBs
NCBI-GeneID:
126334542
NCBI-ProteinID:
XP_049852864
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Position
2:600257987..600530063
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AA seq
581 aa
AA seq
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MEVTKKNFAQILEELENVIPASEFLAIDGEFTGLNKGEEVTAFDTPALYYEKLRKGSSEF
LIVQFGLCAFLYDEKRKKFTHKAYNFYVFPKPPDQRGTEKCFKCQVSSIHFLVENGFDFN
KLYRDGIPYLRQDEEKRLREKLEEKHKASSSAKNCSNGNANDVIPVPADKAEFIEDMCSR
IKNFLSEEEKEELTLEGCNGFVRKLMYQEVSERFHGVRLETRKAAGGDRILVASRLGTNE
EEQQRLKDLQLAEIQDLDSAVGFSHVIRMISQSGKLLIGHNMLLDICLIINQFCTELPES
YLEFKQIVSFLFPRLLDTKYMSFCEPFKSLVSSTVLGHLQKTLSEPPFESIKADPAEDGY
GYSTDSDKYHEAGYDAYVTGLCFLTMVQHLGLKLTSEKLLLSASSLLKPFFNRLYLMRVL
DHPFISIDENEPELPRDHVFHVTFPKEWKTHDVIQLFSPFGRVFVSWLNDTSAYVSLENR
DQAKLVLRTLTQSDTYRVIPYKRHQMLKQPSPPSKKQQTKPSMKRLRTEKDMVTGKAGIG
TIPEEDEELEVPNQDDRKDSDSNVSKKLKLEKIFEENETWE
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggaagtcaccaagaaaaattttgcccaaattctggaggaactagagaatgtcattcca
gcatcagaatttcttgccatagatggagaatttactgggttgaataagggtgaagaagtg
acagcatttgacactccagctttgtattatgaaaaacttcgcaaagggtcttctgagttt
cttattgtccaatttggcttgtgtgcctttttgtatgatgaaaaaagaaagaaatttact
cacaaggcatacaatttctacgtctttccaaagccacctgaccagcgaggcacagaaaaa
tgttttaaatgtcaagtatcaagtattcacttccttgttgaaaatggctttgatttcaac
aagctttatagagatggtattccgtacctcagacaggatgaagagaaaagactgagggag
aaattagaggaaaaacacaaagctagtagttctgcaaagaattgcagcaatggtaatgcc
aatgatgtaattccagtacctgcagacaaagcggaattcatagaagatatgtgctcacgg
atcaaaaatttcctgtcggaggaggagaaagaggagcttactctagagggctgtaatggt
tttgtacgaaagttgatgtaccaggaagtctcggagcgcttccatggagtgcgactggag
acacgtaaagctgctggtggtgacagaatactggttgcttcaagacttgggacaaatgaa
gaagagcagcaaagactaaaagatttacaactagcagaaattcaagaccttgattctgcc
gttggatttagtcatgttatccgcatgatttctcagtcgggaaaattattgattggacat
aacatgctgctcgacatatgcttgattatcaatcagttttgtacagaactaccggaatct
tatcttgagttcaagcaaattgtttcttttttattcccaaggttacttgacaccaaatat
atgagtttctgcgagcctttcaaatcgctggtaagctctaccgttcttggtcatctgcag
aagacattatctgaaccgcctttcgagagcataaaagcagatccagcagaggatgggtat
ggatattctactgatagtgacaagtatcatgaagctggatatgatgcttatgttactgga
ttgtgtttccttactatggtccagcatctgggtttaaagttaacctcagagaagcttcta
ctctctgcatcttcattactaaagccatttttcaatagactttacctgatgagagtactg
gatcatccattcatcagtattgacgaaaatgaaccggaacttccaagagaccacgtattt
catgttacatttccaaaggaatggaaaacacatgatgtaatacagctatttagcccattt
gggcgggtgtttgtttcctggctcaatgatacctcagcttatgtatcgctcgaaaacaga
gatcaagctaagcttgttctgcgaacgttgactcagagtgatacttacagggtgataccc
tacaaacgccatcagatgttgaagcagccaagtccaccatccaaaaaacaacaaaccaaa
ccttcaatgaagaggcttcgcactgagaaagacatggtcactggaaaagctgggattggt
accatcccagaagaagatgaagagttggaagttcctaatcaagatgatcgtaaggattcg
gatagtaatgtaagcaagaaactgaaactcgagaaaatatttgaagaaaatgaaacttgg
gaatga
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