Schistocerca gregaria (desert locust): 126334882
Help
Entry
126334882 CDS
T08688
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
sgre
Schistocerca gregaria (desert locust)
Pathway
sgre03022
Basal transcription factors
sgre03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sgre00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126334882
09124 Replication and repair
03420 Nucleotide excision repair
126334882
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgre03021
]
126334882
03036 Chromosome and associated proteins [BR:
sgre03036
]
126334882
03400 DNA repair and recombination proteins [BR:
sgre03400
]
126334882
Enzymes [BR:
sgre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
126334882
Transcription machinery [BR:
sgre03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
126334882
Chromosome and associated proteins [BR:
sgre03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
126334882
DNA repair and recombination proteins [BR:
sgre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
126334882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
HBB
Helicase_C_2
DEAD
ResIII
nSTAND3
SNF2-rel_dom
AAA_11
Motif
Other DBs
NCBI-GeneID:
126334882
NCBI-ProteinID:
XP_049853538
LinkDB
All DBs
Position
2:736130893..736167061
Genome browser
AA seq
760 aa
AA seq
DB search
MRLDVDGLPVYFPYDYIYPEQYAYMLELKKGLDAKGHCLLEMPSGTGKTISLLSLIVAYM
ANNPLDVTKLIYCSRTVPEIEKVIEELKKLIAYIEKQTEEKPRILGLVLSSRKNLCIHPQ
VSKERDGKIVDGRCHSLTASYIRDRHSYDESVPVCNFYEAFSTFGKEAPMAPGIYGIDDL
KDYGRDMGWCPYFLARYAITHANIVVYSYHYLLDPKIAEVVSKELSKSSVVVFDEAHNID
NVCIDSMSVKITRRIVDRSTANIQLLERTIAEMKEDDAQKLKEEYQRLVEGLRDANLARE
TDIVLANPVLPDEVLNEVVPGNIRNAEHFVAFLKRFVEYLKTRLRVQHVVQESPAGFLKD
VAQKVCIERKPLRFCHERLTSLLKTLEISDLTDFSPLVLITHLATLVATYTKGFTIIVEP
FDDKTPTVSNPILHFSCLDSSIAVKPVFDRFQSVVITSGTLSPLDMYPKILDFHPVIMSS
FTMTLARPCLLPMIVSKGNDQVAISSRFETREDVAVVRNYGQLLVEVASNVPDGVVCFFT
SYLYLESVVASWYDQGVVDSIQRHKLLFIETQDAAETSLALLNYIKACESGRGAVLLSVA
RGKVSEGVDFDHHLGRAVLMFGIPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA
AQCVGRALRGKTDYGIMVFADKRFSRQDKRSKLPKWIQEHLKDSLCNLSTEEAIQIAKRW
LRQMAQPFSREDQLGVSLLTLEQLQNEEMRRNQQAAAEQN
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaggttggatgtcgatggtttgccggtgtatttcccttatgattacatttacccggaa
cagtatgcatacatgttggagcttaagaagggcctggatgcgaagggacattgcctgctg
gaaatgccgtcaggcactggtaaaacaatatcactattgtccttgattgtggcttacatg
gcgaacaacccattggatgtaacaaaattaatatattgttctcgtactgttcctgaaatt
gagaaagttattgaggaacttaaaaagttaattgcatacatcgagaaacagactgaagaa
aaacctaggatacttgggctggtcctgagttcacgcaaaaatctttgcattcatccgcag
gtcagtaaagagcgtgatggcaaaatagtcgatggtcgatgtcacagcttgactgcatcg
tacatacgggaccgtcacagctatgatgagtctgttcctgtgtgcaacttctatgaagcc
ttcagtacttttggcaaagaagctccaatggcacctggtatatatggcatagatgatttg
aaggattatggtcgagacatgggttggtgcccatatttccttgctcgatatgcgatcaca
catgccaacattgttgtttacagttaccactatctcctagatcctaaaattgctgaagtt
gtgtccaaggaacttagcaagtcatctgttgtagtgtttgatgaagcacacaacattgat
aatgtttgtattgactcaatgagtgtgaagataacaaggagaattgtagacaggagtact
gccaacatccagctgctggaacgtactattgctgaaatgaaggaagatgatgctcaaaaa
ctgaaggaagagtaccagagattggttgaaggattgcgggatgctaatcttgcccgtgag
acggatattgtccttgctaatcctgttttaccagatgaagttctcaatgaggtagtgcca
ggaaacattcgaaatgctgagcactttgttgcctttctaaagcgatttgtggagtacctg
aaaacacgtcttagagtccagcatgtggttcaggaatcgccagctggtttcctcaaggat
gttgcacagaaggtctgcattgaaaggaaaccactgaggttttgccatgagcgtctgact
tcattgttaaagactctggagatatctgatctgacagacttttccccgctggttcttatt
acccatttagcaacacttgtagcaacatacacgaaaggctttactattattgtggagcca
tttgatgataaaactccaacagtctcaaatcccatacttcatttcagttgtctggattca
tcaattgctgttaagccagtatttgatcgctttcagtctgtggtaattacttcgggtaca
ctatctcctctggacatgtatccgaagatactggattttcacccagttatcatgagttca
tttactatgacattagcaaggccttgtcttctgccaatgatagtgtcaaaaggcaatgac
caggtagcaatctcatcacgatttgagacacgtgaagatgttgcagtagttcgtaactat
ggtcaacttctggtggaagttgcatccaatgtccctgatggagttgtctgtttcttcaca
tcttacctgtaccttgaatcagttgtagctagctggtatgatcaaggagttgtagatagc
attcagagacataagctgctatttatagagacacaggatgctgcggaaacaagcttagca
cttctgaattacattaaggcatgtgagagtgggcgtggtgcagtacttctttctgtcgca
cgaggcaaagtgtcagaaggtgtcgactttgatcaccatttaggcagagccgtgctcatg
tttggaataccatatgtgtatacacaatcacgcatcctgaaagctcggttggagtaccta
agagaccagttccagataagggagaatgacttcctcacttttgatgcaatgcgacacgca
gcccagtgtgtgggtcgtgcactgcgtggtaaaactgattatggtataatggtatttgct
gacaagagattctcgcgccaggataagcgcagcaaattacccaagtggatacaagaacat
ctcaaagattcattatgtaatctttcaacagaagaagctatccagattgctaaacgatgg
ctgagacaaatggcacaaccatttagccgtgaggaccagctgggagtttcactgttgacg
cttgaacaacttcagaatgaagagatgcggaggaatcagcaagcagctgctgaacaaaac
tag
DBGET
integrated database retrieval system
