Schistocerca gregaria (desert locust): 126335293
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Entry
126335293 CDS
T08688
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36-like isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
sgre
Schistocerca gregaria (desert locust)
Pathway
sgre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sgre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126335293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgre03019
]
126335293
03012 Translation factors [BR:
sgre03012
]
126335293
Enzymes [BR:
sgre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
126335293
Messenger RNA biogenesis [BR:
sgre03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
126335293
Translation factors [BR:
sgre03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
126335293
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
HA2_N
AAA_22
nSTAND3
AAA_19
ATPase
PhoH
TsaE
NACHT
AAA_7
AAA_16
Sigma54_activat
ABC_tran
ResIII
Motif
Other DBs
NCBI-GeneID:
126335293
NCBI-ProteinID:
XP_049854342
LinkDB
All DBs
Position
2:880551202..880751325
Genome browser
AA seq
1083 aa
AA seq
DB search
MYRRNRRGGGPKWFRTGDHNRQESDYKNNGRGGPSYERHSNRSEDRPRGRGRGRPPGLRG
KEIGLYYRDLHKRKRLEEKILVRQRIKLNPSCKEKIMRLLHTAERKWGCPDKRPYLLNAV
KTEEEESQTSEGIVHTAERKGESRDEKPNLSIAIKTEEEEEEEKPQNAELIVHAAERKLK
CPDEKPNLPTGIKTEGGGSQNAECGSVSKGLEHKYKHISDSRFKQQFIRSVTGNMESNLE
HSLSVRVPISQRRDPDLDKILKQQLEQRQMAGGPLLSFRRTLPAYKMQKEILEIIAANQV
VLLSGETGCGKTTQVAQFILDAEIAAERGSICRIVNTQPRRISAISVAQRVAEERDEPCG
GQDSSCGYQIRLEKALPRHTGSILYCTTGILLQWMQSDPALPDISHIVLDEIHERDIISD
FVMTILKDVLPRRPDLKLVLMSATLNAESFSRYFDSCPLINIPGFTYPVQELYLEDVLQV
TGFTMPICNDSDRGYLRYIATARKRHKREEYENWIAPYIRNLEAEGKYSTRVIHSLRNPD
CEELNIELIRALVQYICKNKPEGAILVFLPGWDNISALNRSLEESGAFPPYKYRIIPLHS
LMPTVMQKSVFERPPPGVRKIIISTSIAETSITIDDVVYVVDCGKTKMKNFDIEKNISTL
QPEWVSLANAKQRRGRAGRVQPGVCYHLYTRAREMMLQAYPLPEMLRSRLEEVILQVKIL
QLGRAAEVLTRVMDPPDSRAVDISLQLLHTLGALDQDETLTPLGFHLARLPLDPQTGKMI
LMAAIFGCIDPIFSIAASLSFKDAFVIPLGKESQVDAVKRELAAGSCSDHIVLAEAVRRW
EASGSGRSGFCHRYFLSWNTLTLLKNMKKQFAEHLYEMNFLATADPKDGRANIHSNNRSL
IKAIVCAGLYPNVAIVRKVRKARKAMKYSVTLDTPEDGRVKLHPKSVNEQCPEFPSPLLV
YHQKLRSTAVYLHDTTMVSPLAVLFFGCGIVYEGEDSGDGVVVLPGDLRFACYRETADVI
QRLRDSLDQLLAHKVSHPGPIDWSPRSDEAPLLRAIMDVLSYEDIELRTVAEEVDSCGED
DDF
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgccgaaatagacgtgggggaggcccaaagtggtttcgaacaggggaccataac
agacaggaaagcgattataaaaataatggcagaggtggtcccagctatgagagacacagt
aatcgctctgaagaccgacctagaggaagaggaagaggacgccctccaggactgcgtggc
aaagagattggtttgtactacagggatctgcacaagaggaagagattggaagaaaagata
ttggtgagacagcgaatcaagttaaatccatcatgtaaagagaaaattatgaggttgtta
catacagcagagagaaaatggggatgtccggataaaagaccttatctgttaaatgctgta
aagaccgaagaagaggagtcacaaacttctgagggaattgtgcatacagcagagagaaaa
ggggaatcccgagatgaaaaacctaatctgtcaattgctatcaagactgaagaagaagaa
gaagaagaaaaaccacaaaatgctgagttaatagtgcatgcagcagagagaaaattgaaa
tgtccagatgagaaacctaacctgccaactggtatcaagactgaaggaggaggatcacaa
aatgccgagtgtggatcagtttcaaaaggactggaacataaatataagcacattagcgac
tctcggttcaagcaacagttcattcgtagtgtaacaggcaacatggaatccaatcttgag
cactccctctcagtccgtgttcctatcagtcaacgcagagatcctgatttagacaagatc
ctaaagcagcaactggagcagaggcagatggctggaggaccacttctgagcttccggcgt
actttaccagcatataaaatgcagaaagagatactagaaataattgctgccaaccaggtt
gtcctgctgagtggtgaaacaggctgtggaaagacaacacaagtggcacagtttattttg
gatgcagaaattgctgctgagcgaggatctatatgccgcatagtcaatacacaaccacgg
cgcattagtgccatttctgtggcccagagagttgctgaagaacgtgatgaaccatgtggt
gggcaagacagcagttgtggataccaaatacgacttgagaaggcattgccacgacacact
ggctcaatactctactgtactactggaatcctgctacagtggatgcagtctgatcctgca
ctgcctgacatctcacatatagttcttgatgaaatccacgagcgagatataatttctgac
ttcgtgatgaccattttgaaggatgtcttacctaggcggcctgatcttaaattggtgttg
atgagtgcaacattgaatgccgagtcattttctcggtacttcgacagctgtcctctcata
aacatcccgggattcacttatcctgttcaggaactttacctggaagatgtgctgcaggtt
actgggttcactatgccaatatgtaatgactcagacagaggctatttgaggtatatcgca
acagcgagaaagaggcataagagggaagaatatgagaattggatagcaccatatatcagg
aatctagaagcggaaggaaagtactcaacaagggtgatacacagtctgagaaatcctgat
tgtgaggagctgaatattgagcttattcgtgctttggttcagtacatatgtaagaataag
ccagagggtgccattcttgtttttctacctggttgggataatatttctgcactgaacaga
tcattggaagaaagtggtgcatttccaccatataagtatcgtataattcctctccattct
ctgatgcctactgtgatgcagaaatctgtgtttgagagaccacctccaggagtccgtaaa
attataatttcaacaagcatcgctgagacctcaataacaatagacgatgttgtatatgtt
gtggactgtggtaagaccaagatgaaaaactttgatattgaaaaaaacatatctaccctg
cagccagagtgggtgagccttgctaatgcaaagcagcggcgtggacgagctggaagggtg
caacctggtgtgtgctatcacctttataccagagcacgtgaaatgatgctgcaggcatat
cctttgccggaaatgctgcgttcacgattggaggaggtgattttgcaagtgaaaatcctg
cagctgggccgagctgccgaagttctcacccgcgtgatggaccccccagattcgagagct
gttgatatctccttacagctgctgcacacactaggtgcacttgaccaggacgagaccctc
actcctctgggcttccacctggcacgcctcccactggaccctcagactggcaagatgatt
ctcatggcagcaatctttggttgtattgaccctatattctccattgctgccagcctcagc
ttcaaggatgcctttgtaataccactgggaaaagagagtcaagtggatgctgtaaaacgt
gagcttgctgcaggaagctgcagtgaccacatagtattggcagaggcagtacggagatgg
gaagcctcaggttcggggcgttctggcttttgccaccgttatttcctctcgtggaacact
ctcactttactaaagaatatgaagaagcagtttgcagagcatttgtacgagatgaatttt
cttgcgacggctgatccaaaggatgggagagccaatattcactccaataaccgcagtctt
atcaaagccattgtatgcgctggtctgtatcctaatgttgccattgtcaggaaagtgcgg
aaggcgcggaaagcaatgaagtactctgtaacattggacacacctgaagatggcagagtt
aaactgcatccaaagtcggtgaatgagcagtgccccgaattcccgtctcctttgctggtc
taccaccaaaaactgcggagtacagctgtctatttgcacgatactacgatggtgtcacca
ctagctgtgctgttctttggctgtggcatagtttatgagggagaggactctggtgatggt
gttgttgtactgcctggggaccttcggtttgcctgttatagggagactgctgatgtaata
caaagacttcgagatagtcttgatcagctgctagcacacaaggttagccatcctgggcct
attgactggagcccaagaagtgatgaggcaccactgctcagggccataatggatgtgttg
tcatacgaagacattgaattgcgcacagtggcagaagaagtagacagttgtggtgaagat
gatgatttttga
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