Schistocerca gregaria (desert locust): 126354389
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Entry
126354389 CDS
T08688
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
sgre
Schistocerca gregaria (desert locust)
Pathway
sgre03022
Basal transcription factors
sgre03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sgre00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126354389
09124 Replication and repair
03420 Nucleotide excision repair
126354389
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgre03021
]
126354389
03400 DNA repair and recombination proteins [BR:
sgre03400
]
126354389
Enzymes [BR:
sgre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
126354389
Transcription machinery [BR:
sgre03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
126354389
DNA repair and recombination proteins [BR:
sgre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
126354389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_34
SWI2_SNF2
TniB
CSTF_C
Motif
Other DBs
NCBI-GeneID:
126354389
NCBI-ProteinID:
XP_049859949
LinkDB
All DBs
Position
3:complement(613737145..613820611)
Genome browser
AA seq
790 aa
AA seq
DB search
MGGQKRYKKDDPKKWKKKKKDDDDYSYADDDGEQEGEGIPDAAKKNVEAEDQSALEDEFG
AKDYRSQMVLKTDHQSRPLWVAPNGHIFLESFSPVYKHAHDFLIAISEPVCRPEHIHEYK
LTAYSLYAAVSVGLQTHDIVEYLKRLSKCSVPDGIVEFIKLCTLSYGKVKLVLKHNRYFV
ESPFPEVLQKLLKDPVIQECRLRRNVEDGAEGDGLITQTQDKKGTTQFGSSAPPAEGAAP
TDTDGQAVPEDITSFYDKIDKEDEDEEDSVTKIVSFEVNQEKIEVIQKRCIELEHPLLAE
YDFRNDTVNPDINIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAC
CTVRKRALVLCNSGVSVEQWKQQFKMWSTADDSMICRFTSEAKDKPMGCSILITTYSMIT
HTQKRSWEADQTMKWLQEQEWGIMVLDEVHTIPAKMFRRVLTIVQSHCKLGLTATLLRED
DKIADLNFLIGPKLYEANWLELQKRGFIARVQCAEVWCPMTPEFYREYLVCRTSKKLLLY
VMNPNKFRATQYLVRYHERRGDKTIVFSDNVFALKHYAIKMNKPYIYGPTSQSERIQILQ
NFKFNPKVNTIFVSKVADTSFDLPEANVLIQISSHGGSRRQEAQRLGRILRAKKGAIAEE
YNAFFYTLVSQDTMEMSYSRKRQRFLVNQGYSYKVITKLAGMEEEPDLLYGTREEQGQLL
QQVLAASDADADEERIPGEGPRSASSSGPSVHRRPGNMSSLSGADDAVYLEYKKTSHSNV
KHPLFKKFRA
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgggcggtcagaagagatataagaaggatgatccaaagaaatggaaaaagaagaaaaaa
gatgatgatgattattcatatgctgatgacgatggagaacaagaaggagagggtattcca
gatgctgctaagaaaaatgtggaggcagaagatcagtctgctctggaagatgaatttgga
gctaaagattacagatcacagatggtacttaaaactgaccatcaatctaggcctctttgg
gtagctccaaatggccatatttttctagaatcattttccccagtatataaacatgcccat
gacttcttgatcgcaatatccgaacctgtatgccgaccggaacacattcatgagtacaaa
ctcacagcttactcactttatgctgctgtgagtgttggacttcagacacacgacatagta
gagtacctaaaacgccttagcaaatgcagtgttcctgatggcattgtggaattcatcaag
ctttgtacattgtcatatggaaaggtgaaactggttttaaaacacaatcgttattttgtt
gagtcaccatttcctgaagtgcttcagaagctactgaaagatccagtaattcaagaatgc
cggttacgtcgaaatgtggaagatggtgctgagggtgatgggctgatcacacagacacag
gacaagaaaggtacaacacagtttggcagcagtgcacctcctgcagaaggtgcagcgcca
acagatacagatggccaggctgtaccggaggacataactagcttctatgacaagattgat
aaggaagatgaggacgaagaggattctgttacaaaaattgtgtcatttgaagtcaaccag
gaaaaaattgaggtgatccagaagcgttgtattgagctggagcatcctctgctggcagag
tatgattttcgaaatgacactgtgaatccagatatcaacattgatttgaagccttccgca
gtcctacgcccttatcaagagaagagcctccgtaaaatgtttggcaatggtagagctcgg
tctggtgttattgttctgccatgtggtgctgggaagagtcttgtgggtgttaccgcttgt
tgcactgttagaaagagagcacttgtcctgtgcaactctggagtctctgtggaacagtgg
aagcaacagttcaaaatgtggtccacagcggatgacagcatgatatgccgtttcacatct
gaagctaaagacaaaccaatgggatgcagcattcttattacaacatactcaatgattacg
catacacagaaacgttcgtgggaagctgaccagaccatgaagtggcttcaagagcaggag
tggggtattatggtccttgatgaggttcacactataccagcaaaaatgtttcggcgtgtc
cttacaattgtccagtcacattgtaagttaggcctcactgcaacattgctccgtgaggat
gataaaattgcggacctcaacttcttgattggccccaagctctatgaagctaattggctg
gagttgcagaaacggggttttattgcaagagttcagtgtgcagaagtgtggtgtccaatg
acacctgaattttaccgtgaatacttggtctgtagaaccagcaaaaaattgcttctgtat
gtgatgaatccaaacaaatttcgtgcaacgcagtacctggtccgctaccatgaaaggcgt
ggagacaagacgattgtgttttctgataatgtttttgctttaaaacattatgccatcaaa
atgaacaaaccatacatctatggccccacatcccagagtgagagaatacagatacttcag
aacttcaaattcaacccaaaagtgaacaccatatttgtcagtaaagtggctgacacatca
tttgatcttccagaagcaaatgtgttgatccaaatctcatcgcatggaggctcccgtaga
caggaagctcagcgactgggtcgtattcttcgagctaagaagggagcaatagcagaggaa
tataatgctttcttctacaccctggtgtcacaggatacaatggaaatgagctactcacga
aaaagacaacgattccttgttaaccaagggtatagctacaaagttattactaaacttgct
ggaatggaagaggaaccagatctactatatggaactcgtgaagaacaaggacagctgcta
cagcaggtactagcagcaagtgatgcagatgctgatgaggaacgtatccctggagaaggg
ccccgatctgcttcaagttctggtccatcagttcataggcggccaggaaacatgagttcc
ttatctggagccgatgatgcagtgtacttggagtataaaaagacatcacattcaaatgtc
aaacaccctctgttcaaaaagttcagggcatag
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