Schistocerca gregaria (desert locust): 126354833
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Entry
126354833 CDS
T08688
Name
(RefSeq) ATP-dependent RNA helicase DDX42
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
sgre
Schistocerca gregaria (desert locust)
Pathway
sgre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sgre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126354833
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sgre03041
]
126354833
Enzymes [BR:
sgre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126354833
Spliceosome [BR:
sgre03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
126354833
Complex B
126354833
Complex C
U2 SnRNP specific factors
126354833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Cas3-like_C_2
P-loop_SecA
MscL
Asp_DH_C
Motif
Other DBs
NCBI-GeneID:
126354833
NCBI-ProteinID:
XP_049860738
LinkDB
All DBs
Position
3:complement(856685781..856774971)
Genome browser
AA seq
755 aa
AA seq
DB search
MSFNKGGDGRPRGFGFSGFQLKRDKSNQLPPPPSSAISKHGYSTMSAISQNALAASYGLP
RKRSKTEEEYFDEDDEHTTPTSTLEYIPAPGSPSYQEPKNDSSDSDEDPLDAYMAGIEQQ
VHRETTKIMEKDDKKKGIRDDIEEEDVEESYYRYMEENPLAGVQNEESDLEIEYDEDGNP
IAPKKNKEIDPLPPIDHSTIKYDDFEKNFYNVHEEIERLTTDQVEDLRQKLGIKVTGPDP
PHPVTSFAHFGFDEALMKSVRKSEYTQPTPIQAQAVPAALAGRDIIGIAKTGSGKTAAFV
WPMLVHVADQRELSPGEGPVGLILAPTRELSQQIYAEAKRFGKVYGLRVVCCYGGGSKWE
QSKALEEGAEIVVATPGRMIDMVKMKATNLQRVTFLVLDEADRMFDMGFEPQVRSICNHV
RPDRQTLLFSATFKKKVERLARDVLTDPIRIVQGDVGEANADVTQVVKVLPPGAAKWNWL
LRSLVEFLSSGSVLIFVTKKANAEELSNNLKLKEYDVLLLHGDMDQAERNKVITQFKKKE
VNVLVATDVAARGLDIPHIRTVVNYDVARDIDTHTHRIGRTGRAGEKGTAYTLVTEKDKE
FAGHLVRNLEGANQDVPQSLLDLALQSAWFRKSRFKSGKGKPANVGGRGLGYREKPGIGS
HETQSPNTGLGDLIPKPKSGPGTDRLSAMKAAFRSQYQSQFLASSDHTWEQTIEQKPSFL
SPQMEAQIENCPPPPPPQQSTGSSRRVKKSRWDNS
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcaacaaaggtggtgatggaaggccgagagggtttggattttcgggcttccag
ctgaagcgggataagagcaatcagttaccacccccaccgtctagcgccataagtaaacat
gggtattctacaatgtcagcaatcagccaaaacgctcttgcagcaagttatggtttacca
agaaaaagatcaaaaactgaagaagagtattttgatgaagatgatgaacatactacacca
acatcaacactggagtacattcctgccccgggcagcccatcatatcaagaaccaaagaat
gacagctcggattcagatgaagatccattggatgcatacatggcaggcattgaacaacaa
gtacacagggaaacaacaaaaattatggagaaagatgataagaagaaaggtattagagat
gatattgaggaagaagatgtagaggagtcttattacagatacatggaagagaatccttta
gctggtgtgcaaaatgaagagtctgacctagaaatagagtatgatgaagatggaaatcca
attgcaccaaagaaaaacaaagaaattgaccccttacctccaatagaccattcaacaatc
aagtacgatgacttcgagaaaaatttctataacgtacatgaagaaatagaaaggctcaca
acagaccaagtggaggatctgagacaaaaacttggaatcaaggtaacgggtccagatcca
cctcatccagtgactagcttcgcacacttcggatttgatgaagctctgatgaaatcagtt
cgaaagtctgaatatactcagccgacacccattcaggcccaggcagttcctgctgcattg
gcagggagggacataatagggattgccaaaacagggtctggaaaaactgctgcctttgtc
tggcccatgctggtacatgttgccgaccagcgtgaactgtcaccgggtgaaggccccgtg
ggacttattttggcacccacaagagaactttcacaacaaatatatgccgaagccaaacgt
tttgggaaggtgtatggcttgcgtgtcgtttgctgttatggtggaggttctaagtgggaa
cagtcaaaagccctagaggaaggagctgaaattgtggttgcaacaccaggtcgtatgatt
gacatggtcaagatgaaagccacaaatctccaaagagtcacgtttcttgtgctcgacgag
gctgatcgcatgtttgatatgggatttgagccacaggtgcggtcaatctgtaaccatgtg
cgacccgatagacagacactgcttttcagtgctactttcaagaagaaagttgagagattg
gcaagggatgttctcactgatccaatacggattgttcagggagatgtcggtgaagcaaac
gcagatgttacccaggtagtgaaagtattgccccctggagctgcgaagtggaactggctt
ttgaggtcacttgttgaatttctgtcatcaggaagtgtccttatatttgtcacaaagaag
gcaaatgctgaagaattatctaataatttaaaactgaaggagtacgatgttttgttgctg
catggtgacatggatcaagcagagaggaataaagttataactcagtttaagaaaaaggaa
gtcaacgttttggtggcaactgatgttgcagctcgtggtttggacattccacacatacgg
actgttgttaattatgatgttgcccgtgacattgatactcacacacatcgtattggaaga
acaggtcgtgctggagagaaaggtacagcgtacacacttgtgacagaaaaggacaaggag
tttgcaggtcatctggtacgcaatctcgaaggtgccaatcaagacgtccctcagtcgctc
ctagatcttgctttgcagagtgcctggtttcgcaagtcacgcttcaaaagtggtaagggt
aagccagcaaatgttggtgggcgagggcttggctaccgagaaaaaccaggaattggttca
catgaaacacagagccctaatactggacttggtgatttgattccaaaaccaaagtctgga
cctggtacagacagattgtctgcaatgaaggcagcattcagaagccagtatcaaagccag
ttcctggcatcttcggatcacacctgggagcagacaattgagcagaaaccttcatttttg
agtccacaaatggaggcgcaaattgagaactgccctcctcctccaccaccacagcaatcc
acaggcagcagccggagagtgaagaaaagccgctgggacaactcgtag
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