Schistocerca gregaria (desert locust): 126357309
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Entry
126357309 CDS
T08688
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
sgre
Schistocerca gregaria (desert locust)
Brite
KEGG Orthology (KO) [BR:
sgre00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sgre01009
]
126357309
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgre03019
]
126357309
04131 Membrane trafficking [BR:
sgre04131
]
126357309
03036 Chromosome and associated proteins [BR:
sgre03036
]
126357309
Enzymes [BR:
sgre01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
126357309
Protein phosphatases and associated proteins [BR:
sgre01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
126357309
Messenger RNA biogenesis [BR:
sgre03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
126357309
Membrane trafficking [BR:
sgre04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
126357309
Chromosome and associated proteins [BR:
sgre03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
126357309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
C1_2
Motif
Other DBs
NCBI-GeneID:
126357309
NCBI-ProteinID:
XP_049863401
LinkDB
All DBs
Position
1:complement(588622493..588941198)
Genome browser
AA seq
1238 aa
AA seq
DB search
MRIKHKNQKSPISDSASPPLTHARPVLSVKPSQAIVAAKRNAKLKQTSKKQAEIIIKDIY
ESARECKEMIRGSTGVIFDRRMVEHHCLWDSNYPESPERFSRVLHRCEELGLLPRCTLIT
PRTAEEYEVLYKHEERHIEILKATENCKDEESLEKLSSKYDAIYIHPSTYQLSLLAAGCA
IEIVDAVCRKKIQNGMAIVRPPGHHAMKSEYCGYCFFNNVALAAEHALNNCDISRIVIVD
WDVHHGQATQQMFYDDPRVVYFSIHRYEHGSFWPNLRESDYDYIGEGKGKGYNFNVPLNK
TGMTDADYLAIFHHVLLPVVLEFQPELLIVSAGYDSALGDEKGEMNITPVCYAHLLSSLM
CLASGKIVVVLEGGYCLKSLAEGAALTLRCLLGDPCPPLPSLPPPSDSITESILNVIYAH
RDYWKSLQIQDVHKKLTEAETNPNNRIREEKMTSAVVKLYQIPPTLFLGSSEKPEHYETR
NCYPVQSEALLKELDATLNKLIVGTNLSFAPNRVCIVYDEVMMKHKNIAEPTHPEKPERI
SAIFLKHEEYGLLDRCLRLKARPVTDEELELLHSRDHIKKMKDIKNMKLNDILKMQDDFS
SMYLHPETYESAAVAAGSVLEVVDSVLNGDSRSGVAIVRPPGHHAEEGEACGFCVFNNVA
LAAKYAVKIHGLKRVLILDWDVHHGNGTQHMFEEDPSVVYISLHRYDNGSFFPGSTDANY
TEVGVGPGKGYNINIPWNKRGMGDGDYVTAFHQVVLPVCYQFNPELVLVSAGFDAAIGDP
LGGCKVTPEAYGHMAHWLSSLANGKIILCLEGGYNITSISYAMTLCSKALLGDPLPPLQA
KLAPSQSAINTIRNVVKVQSNYWSCLRFGVSFLDQQYLTDHMKAVGDTDVISSCSQCKEE
MSAQIPNASSISLEDTFDRINLREEVALHYSKSASSHITTKDNYLNDSNYFSSSGEDKSP
DSPMDFSGTSSLISPISSPGDCNPSWSLSPPVSVTIPENVCNETVVNTQFSDKIEAELEL
DEKNRNVARKNSELSLLSDLGHDSNENPITEKHPKGIGDTEVSLRRMADNNTSSSGSNSQ
QAGASNSADGGDAADSSAASGSSSRPRRLVDYLAENMQMLVAGEMFAVVPLPGCPHLDRV
REVPPCGINCTLPCLECGSTRENWICLECYTVHCGRYVNGHMVEHGMEMSHPITLSFSDI
SVWCYACEAYIENQVLYSAKNAVHRSKFGIEMPWSYND
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atgcgtataaagcacaaaaaccaaaagagtccgatttcagacagcgcatccccccccctt
acgcacgcgcgacctgtgttgtctgtgaaaccttcacaggctatagtggcagccaaaagg
aatgctaagttgaagcagacatctaaaaaacaagcagaaatcattataaaggatatttat
gagagtgcaagggaatgtaaagaaatgattcgtggttcaactggggtcatttttgacaga
cggatggtagagcatcactgtctgtgggattccaactatccagaaagcccagagaggttt
tcaagagtactacacaggtgtgaagaacttggccttcttcctcgttgtactctcattact
ccgcgaactgctgaagaatatgaagtcttatacaaacatgaagaaagacatatagagatt
ctcaaagcaacagagaactgtaaagatgaggagtccctagagaagttatcctccaaatat
gatgccatctatattcatccaagtacataccaactttcattactggctgctggctgtgct
attgaaattgttgatgcagtatgcagaaagaagattcaaaatggaatggcaattgtcagg
ccacctggtcatcatgccatgaaaagtgaatactgtggttactgcttctttaacaatgta
gcgttggcagcagaacatgccttgaataattgtgatatatcacgtattgttatagttgat
tgggatgttcaccatggtcaggcaactcagcaaatgttttatgatgatcctagggttgtg
tacttttctattcatcgttatgaacatggctccttttggccaaatttgagagagtctgat
tatgactacattggggaaggaaaaggaaaaggatacaactttaatgtaccactgaataaa
acaggaatgactgatgctgattatttagctattttccatcatgtactattaccagtggtt
ttggagtttcaacctgagctgttgatcgtgtctgcgggctatgactcagctttgggcgat
gagaagggggaaatgaacataactcctgtgtgctatgcccatttactgtcttctctaatg
tgtctggcaagtggaaaaattgttgtggtgctagagggagggtactgtttgaaatcctta
gcggaaggtgctgcacttactttgcgatgcttgcttggagatccttgcccaccactacca
agtcttcctcctccaagtgacagtattacagaatcaattctgaatgtgatatatgcccat
cgagactactggaagagcctacagattcaagatgtgcataaaaaattgacagaggcagaa
acaaatccaaataacaggataagggaggagaagatgacgtcagcagtcgtaaagctgtac
cagatacctccaactctttttctggggtcatctgaaaaaccagaacactacgaaacacgg
aattgttaccctgtccaaagtgaagcacttctcaaggagctggatgctacactaaataaa
ttaatagttggtactaacttatcatttgcaccaaatcgagtctgcattgtgtatgatgaa
gtgatgatgaaacacaagaacattgctgaacctactcacccagaaaaaccggaaagaatt
tctgccatatttcttaaacatgaagaatatggactgctagacagatgcttgagattgaag
gctcgtcctgtgactgatgaagaactagagctattgcattcgagggatcatataaagaag
atgaaagacataaaaaacatgaaactgaatgacatccttaagatgcaggatgacttctca
tcaatgtatttgcacccagaaacttatgaatcagccgcagttgcagctggatcagtgctt
gaggtggtagactctgttctaaatggagacagccgatcaggagtagcaattgtaagacct
cctggacaccatgcagaggaaggtgaagcgtgtggcttttgtgttttcaacaatgttgct
ttagcagcaaaatatgctgtgaagatacatggtctgaaaagagttcttatccttgactgg
gatgttcatcatggcaatggcactcagcacatgtttgaggaagaccctagtgttgtatac
atatcacttcatcggtatgacaatggcagtttctttccggggtcaacagatgcaaactac
acagaagttggtgtaggtccaggaaaaggttataatatcaatataccttggaacaagcgt
ggaatgggtgatggagattacgtcacggcgtttcaccaggtagtgcttcctgtgtgttac
cagttcaacccagaactggtacttgtctctgctggctttgatgctgctattggtgatcca
ttaggaggttgtaaagtaacacctgaagcatatggtcacatggcacattggctgtcttca
ttagcaaatggcaaaataattttatgtttagaaggcggatacaatattacatcaatctcc
tatgctatgacactttgctcaaaagctcttcttggtgatcctttaccaccattacaagca
aagttagctcccagccaaagtgctataaatacaattcgcaatgttgtaaaagttcagagt
aattattggtcttgtcttagatttggagtttctttccttgatcagcaatacttgactgac
catatgaaagcagtgggagatactgatgtgataagcagttgttcacaatgcaaagaagaa
atgtcagcacagattcccaatgccagttcgatttcattggaagatacatttgatagaata
aatttaagagaggaagtggcactacactattcaaaatctgcatctagtcacataacaacc
aaagataactacttaaatgatagcaattatttctcaagttctggtgaagacaagtctcca
gacagtcctatggacttttcaggaacaagttcacttataagcccaatttcttctccaggg
gactgtaacccatcttggtctcttagcccaccagtcagtgtcacaataccagagaatgtt
tgtaatgaaacagttgtaaatacacagttttctgacaaaattgaagctgaacttgaacta
gatgagaaaaacagaaatgtagcaagaaaaaattctgaactttcacttttgtcagattta
ggacacgatagcaatgagaatccaatcacagaaaaacatccaaaaggtataggagatact
gaagtatcacttcgcagaatggcagataataatacaagcagcagtggaagcaactcccaa
caagctggagcaagtaattctgcagatggtggggatgctgctgattcttctgctgcgtct
gggtcaagcagcagaccacgtcgtcttgtggactacttagctgaaaatatgcagatgttg
gtggctggagaaatgtttgctgttgtaccattgcctggttgtcctcacttggatcgtgta
agagaagtgcctccatgtggtataaactgcactctaccttgtcttgagtgtggctcaaca
agagagaattggatctgtcttgaatgttatactgttcactgtggccgatatgtaaatgga
catatggtggagcatggtatggaaatgtcacacccaatcacactcagtttttctgacatt
tcagtctggtgctatgcatgtgaagcatatattgaaaaccaggttctgtacagtgccaaa
aatgcagttcaccgcagcaagtttggaattgaaatgccatggtcatataacgattaa
DBGET
integrated database retrieval system
