KEGG   Streptomyces graminofaciens: SGFS_007090
Entry
SGFS_007090       CDS       T09325                                 
Name
(GenBank) hypothetical protein
  KO
K10979  DNA end-binding protein Ku
Organism
sgrf  Streptomyces graminofaciens
Pathway
sgrf03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:sgrf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    SGFS_007090
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sgrf03400]
    SGFS_007090
DNA repair and recombination proteins [BR:sgrf03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     SGFS_007090
SSDB
Motif
Pfam: Ku Cdh1_DBD_1
Other DBs
NCBI-ProteinID: BBC29415
LinkDB
Position
complement(803935..804534)
AA seq 199 aa
MNASICLGIHDSMSPLRRAELLRLLEERDADSTTLFNLQGRIAETEQKNLTGKLVEVLAR
TKLVAMAKVAIRSRERKAVLRPYRGLLLLQNLRWSDEIRDPGDLAHLVPAVPLSDRERRL
AEVLVQEMIGVDDSVDHDGYAHALEQLVDAVASGDELAEPPPQPEPAVDLMTALQQSVDE
ARAARHPTKRPSKADRQGR
NT seq 600 nt   +upstreamnt  +downstreamnt
gtgaacgcctcaatctgcctgggcatccacgacagcatgagcccccttcggcgggcggag
ctgctgcggctgctggaggagcgcgacgcggacagcacgacgctgttcaacctgcaaggg
cgcatcgctgagactgaacagaagaacttgacagggaagttggtggaggtcctcgcccgg
acgaagctggtggccatggccaaggtcgcgatccgcagccgcgaacgcaaggcggtactc
cggccgtaccgcggactgctgctgttgcagaacctgcgctggagcgatgagatccgcgac
cccggcgacctcgcccacctggtccccgccgtcccgctcagcgaccgtgagcgacggctc
gcggaggtgctggtgcaggagatgatcggcgtcgacgacagcgtggaccacgacgggtac
gcccacgccctggagcagctggtcgacgccgtcgcctcgggagatgagctggccgaaccg
cctcctcagcccgagcctgccgtcgatctcatgaccgcgctgcagcagagcgtcgatgag
gcacgagccgcccggcaccccacgaagcgcccttcgaaggccgaccggcaggggaggtga

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