Streptomyces graminofaciens: SGFS_008480
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Entry
SGFS_008480 CDS
T09325
Name
(GenBank) Deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sgrf
Streptomyces graminofaciens
Brite
KEGG Orthology (KO) [BR:
sgrf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgrf03400
]
SGFS_008480
Enzymes [BR:
sgrf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
SGFS_008480
DNA repair and recombination proteins [BR:
sgrf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
SGFS_008480
Prokaryotic type
SGFS_008480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BBC29554
UniProt:
A0ABM7F1U6
LinkDB
All DBs
Position
942787..944157
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AA seq
456 aa
AA seq
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MNVSVILFTADLRLHDHPPLRAALDGSRQVVPLFVRDPAVDRAGFAAPNRLAFLADCLRD
LDTGLRERGGRLVVRSGDVVEQVLKVVAEADADEVHLAADVSAHARHRETRLRRVLEEQG
VRLHVHDTVTTAVPPGALSPAASDHFAVFTPYFRQWSREPIRDTLAAPRAVPVPDGVGSE
PLPSRTAVTGLSDGLAPGGEQAGRSRLTAWLRDGITAYEDRHDDLAGDATSRLSPHLHFG
TLSPVELVNRARRAGGGAGAEAFVRQLAWRDFHRQVLAARPEAASVDYRTRNDRWRSVPD
EVEAWREGRTGYPVVDAAMRQLRHEGWMHNRGRLLTASFLTKTLYVDWRVGARHFLDLLV
DGDVANNQLNWQWMAGTGTDSRPNRVLNPVTQAKRYDPDGTYVRRWVPELAHVEGPGVHE
PWKLRGLDRAATDYPEPIVELSEGRARFLRGRGMAV
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtctcggtcatcctgttcaccgccgatctgcgcctgcacgaccatccgccgctg
cgggccgccctcgacggctcccgccaggtcgtcccgctgttcgtacgtgaccctgccgtg
gaccgcgccggcttcgccgcccccaaccggctcgcctttctcgccgactgtctgcgggac
ctggacaccggcttgcgcgagcgcggcgggcggctcgtggtgcgctcgggcgacgtcgtc
gagcaggtgctcaaggtggtggccgaggcggacgccgacgaggtgcacctggcggccgac
gtcagcgcccacgcacgtcaccgggagacacggctgcggcgggtactggaggagcagggc
gtacgactgcacgtccacgacaccgtgaccacggccgttccgccgggcgcgctgtccccc
gccgcgtcggaccacttcgccgtcttcaccccgtacttccggcagtggtctcgggagccc
atccgcgacaccctggcggcaccccgcgccgtgccggtcccggacggagtcggctcagag
ccgctcccttcccgtacggccgtcacggggctgtcggacggtctcgcgccgggcggcgag
caggcgggccgcagtcgtctgaccgcgtggctgcgcgacggaatcacggcgtacgaggac
cgccacgacgacctggcgggcgacgcgacctcccgcctctcgccccatctgcacttcggc
accctctcgcccgtcgaactcgtcaaccgggcccgccgggcgggcggcggcgcgggcgcg
gaggcattcgtacggcagctcgcgtggcgggacttccaccggcaggtgctggcggcccgc
ccggaggcggcatccgtcgactaccgcaccaggaacgaccgttggcggtcggtgccggac
gaggtcgaggcgtggcgggagggccgcaccggctacccggtggtcgacgcggcgatgcgc
cagctccgccacgagggctggatgcacaaccgtggccgactgctgaccgcgagcttcctc
accaagacgctgtacgtggactggcgggtcggcgcccggcatttcctggacctgctcgtc
gacggcgatgtggccaacaaccagctcaactggcagtggatggccggcaccggcacggac
agccgccccaaccgcgttctcaacccggtcacccaggcgaagcggtacgaccccgacggg
acatacgtacgccgctgggtgccggagttggcgcacgtcgaggggcccggcgtgcatgaa
ccatggaagctgcggggcctggaccgcgccgcgacggactatccggagccgatcgtcgag
ttgagcgagggacgggctcggttcctgcgtgggcgtgggatggcggtgtag
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