Streptomyces graminofaciens: SGFS_009440
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Entry
SGFS_009440 CDS
T09325
Name
(GenBank) putative glycosyl hydrolase
KO
K01198
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
sgrf
Streptomyces graminofaciens
Pathway
sgrf00520
Amino sugar and nucleotide sugar metabolism
sgrf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sgrf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
SGFS_009440
Enzymes [BR:
sgrf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
SGFS_009440
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Motif
Pfam:
Glyco_hydro_43
GH43_C2
Motif
Other DBs
NCBI-ProteinID:
BBC29650
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Position
complement(1047418..1049022)
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AA seq
534 aa
AA seq
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MIHNPVLRGFEPDPVILRVGDDFYIATSTFEWYPGVRLHHSRDLVNWRSLGGVLDSRRLL
DLTGVPDSGGIWAPGLSYADGLFHLVFTVVDTYAEGWKDLPNHVTTAPSIEGPWSDPVPL
HGRGFDVSLFHDIHEGDGRSWLLNMRFDWRPDRESFAGIELQEYDRAARKLLGAPRTISV
GTAAGVAEGPHLYRRNGWYYLVHAEGGTGYEHGAAVARSRDLFGPYEPDPAGPLLTSRHD
PTLELQKAGHCSLVETQDGQWYAAHITARPYSERGRCVRGRETALQPVTWTEDGWPRIAG
AVPAVTVRAPDLAPAPVPQRPATDHFDAPALGPDWSTLRRPADPEWVEPAPGRLRIRGGQ
SPVGRRTPSLVARRVTARRCSFETELTFAPGSSDHMAGLTAYYNTRNWHYLYVTAEDDGS
PALRALSCEAGKLTAHPPRIPLAPGRPVVLHAELDGPDLHFSYDTGGEGPQELGPVLDAT
VLSDEHADEFHEGQLRVLGFTGAMLGLWVQDLDGSGVHADFAHATYRTTPGAHS
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
gtgatccacaaccccgtcctgcgcggtttcgaacccgaccccgtgatcctgcgggtcggc
gacgacttctacatcgccacgtccaccttcgagtggtacccgggggttcgccttcaccac
tcccgggacctggtgaactggcggtcgttgggcggggtcctggacagccgacgcctgctc
gacctgacgggcgtacccgactccggcggtatctgggcacccggactctcgtacgccgac
ggcctgttccacctggtgttcaccgtggtcgacacctacgcggagggctggaaggacctc
cccaaccacgtcaccacggccccgtccatcgagggcccgtggtcggacccggtgccgctg
cacggccggggcttcgacgtgtccctgttccacgacatccatgaaggggacgggcgcagc
tggctgctcaacatgcgcttcgactggcgcccggatcgggagtcgttcgccgggatcgag
ctccaggaatacgaccgcgcggcgcgaaagctgctcggcgcgccccggacgatctccgtg
ggcaccgccgccggggtcgccgagggcccacacctctaccgtcggaacggctggtactac
ctcgtccacgccgagggcggcaccggctacgaacacggggctgcggtcgcccgctcccgg
gatctgttcggcccgtacgagcccgacccggccggacccctgctcacctcccggcacgat
ccgaccctggaactccagaaggccggacactgctcgctggtcgagacccaggacggccag
tggtacgccgcccacatcaccgcccgcccctacagcgagcgcggccggtgcgtacggggc
cgggagaccgccctgcagcccgtgacctggaccgaggacggctggccgcgcatcgcgggc
gcggtccccgccgtgaccgtacgggcgcccgacctggctcccgctccggtgccccaacgg
cccgccacggaccacttcgacgccccggccctcggccccgactggtccactctgcgccgc
ccggccgatccggagtgggtcgaaccggcgccgggccgactgcgcatccggggcggtcag
tccccggtcggccgtcggacgcccagtctggtcgcccggcgggtgacggcacggcgctgc
tcgttcgagaccgagctgaccttcgcgccgggttcctccgaccacatggccggactcacc
gcgtactacaacacccgcaactggcactacctgtacgtcacagccgaggacgacggctcc
ccggcactgcgggcactgagctgcgaggcaggaaagctcaccgcgcacccgcccaggatc
ccgctcgcacccgggcgccccgtcgtactccacgccgaactcgacggtcccgacctgcac
ttctcgtacgacaccggcggcgaaggtccccaggagctggggccggtcctcgacgcgacc
gtcctgtcggacgagcacgccgacgagttccacgagggacagctgagggtcctgggcttc
accggtgcgatgctgggactctgggtgcaggacctcgacggttccggcgtgcacgcggac
ttcgcccatgccacctaccgcaccaccccgggcgcccactcatga
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