Streptomyces graminofaciens: SGFS_011350
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Entry
SGFS_011350 CDS
T09325
Name
(GenBank) Serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sgrf
Streptomyces graminofaciens
Pathway
sgrf00260
Glycine, serine and threonine metabolism
sgrf00460
Cyanoamino acid metabolism
sgrf00630
Glyoxylate and dicarboxylate metabolism
sgrf00670
One carbon pool by folate
sgrf00680
Methane metabolism
sgrf01100
Metabolic pathways
sgrf01110
Biosynthesis of secondary metabolites
sgrf01120
Microbial metabolism in diverse environments
sgrf01200
Carbon metabolism
sgrf01230
Biosynthesis of amino acids
sgrf01240
Biosynthesis of cofactors
sgrf04981
Folate transport and metabolism
Module
sgrf_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
sgrf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SGFS_011350
09102 Energy metabolism
00680 Methane metabolism
SGFS_011350
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SGFS_011350
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
SGFS_011350
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SGFS_011350
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
SGFS_011350
Enzymes [BR:
sgrf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
SGFS_011350
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
BBC29841
LinkDB
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Position
complement(1251686..1252969)
Genome browser
AA seq
427 aa
AA seq
DB search
MSALNTPLAQLDPEVHEALRAELHRQQSTLEMIASENFAPTAVMEAQGSVATNKYAEGYP
GRRYYGGCEHVDVTERLAIERVKALFGAGYANVQPHSGAQANTAVFFALLQPGDTILGLD
LAHGGHLTHGMRINYSGKMLNVVPYHVAAEDNLVDMDEVERLAKEHRPKMIIAGWSAYPR
QLDFAAFRRIADEVGALLMVDMAHFAGLVAAGLHPNPVPHAHVTTTTTHKTLGGPRGGVI
LTNEADLAKKINSAVFPGMQGGPLEHVIAAKAVSFKVAASEEFAERQARTLAGSRILAER
LTRPDAAAAGVKVLTGGTDVHLVLVDLRESELDGRQAEDLLHEIGITVNRNAVPFDPRPP
MVTSGLRIGTPALATRGFTEDDFTEVADVIALALQPGPDIGALRARTEALAAKHPLYPHL
SEHGDAR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgctgaacacccccctggcgcagctggaccccgaggtccacgaagccctgcgc
gccgaactgcaccgccagcagtccaccctcgagatgatcgcctcggagaacttcgcgccc
accgccgtgatggaggcgcagggctcggtcgcgaccaacaagtacgccgagggctacccc
ggacgccggtactacggcggctgcgaacacgtcgacgtcaccgagcggctcgccatcgag
cgggtcaaagccctcttcggcgcgggctacgccaacgtccagccgcactcgggcgcccag
gccaacaccgccgtcttcttcgccctgctccagccgggcgacacgatcctcgggctcgac
ctcgcgcacggcgggcacctcacccacggcatgcgcatcaactacagcggcaagatgctc
aacgtcgtgccgtaccacgtggccgcggaggacaacctcgtcgacatggacgaggtcgag
cggctcgccaaggaacaccgccccaagatgatcatcgcgggctggtcggcgtacccgagg
cagctggacttcgcggccttccggcggatcgccgacgaggtgggcgccctgctgatggtc
gacatggcccacttcgccggcctggtcgccgccgggctgcaccccaaccccgtcccgcac
gcccatgtgacgaccacgacgacccacaagacgctcggcggtccgcgcggcggcgtcatc
ctcaccaacgaggccgacctcgccaagaagatcaactcggcggtgttcccggggatgcag
ggcggaccgctggagcacgtcatcgccgcgaaggcggtgtcgttcaaggtcgccgcgtcc
gaggagttcgccgaacgccaggcccgtacgctggccggctcccgcatcctcgccgaacgc
ctcacccgccccgacgcggcggccgccggggtgaaggtgctgaccggcggcacggacgtc
cacctcgtcctcgtcgacctgcgggaatcggagctcgacggccgacaggccgaggacctg
ctccacgagatcggcatcaccgtcaaccgcaacgccgtccccttcgacccgcgcccgccc
atggtcacctcgggcctgcgcatcggcacccccgcgctggccacccggggcttcaccgag
gacgacttcaccgaggtcgccgacgtgatcgcgctggccctccagcccggtccggacatc
ggcgccctgcgcgcccgtacggaggcgctggccgccaaacacccgctctacccgcacctc
tcggaacacggagacgcccgatga
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