KEGG   Streptomyces graminofaciens: SGFS_015410
Entry
SGFS_015410       CDS       T09325                                 
Name
(GenBank) Pectate lyase
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
sgrf  Streptomyces graminofaciens
Pathway
sgrf00040  Pentose and glucuronate interconversions
sgrf01100  Metabolic pathways
sgrf02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:sgrf00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    SGFS_015410
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SGFS_015410
Enzymes [BR:sgrf01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     SGFS_015410
SSDB
Motif
Pfam: Pectate_lyase_4
Other DBs
NCBI-ProteinID: BBC30247
UniProt: A0ABM7F3B5
LinkDB
Position
1707300..1708232
AA seq 310 aa
MAAAAALVSTAVLVLPQSATAAETSPIGFGAGTTGGGGASAVTVSTLAAFKSAVTGDSAK
VIRVSGLISLSGQVDIGSNTTVLGVGSSSGFTGGGLRIKEETNVVVRNLNISKPLAPADG
ITVQESTKVWIDHNSFSADRTHDKDYYDGLLDINHGSDHVTVSWNTFKEHFKGSLVGHSD
NNASEDTGHLRVTYHHNHFSNVYSRIPSLRFGTGHFYNNYVDGAETACHSRMGAQMLVEN
NVFRNTGVAVTTNRSSDVDGYANLRGNDLGGAATEISRTGSFTAPPYGYSAEPASSVVAS
VTSGAGAGKL
NT seq 933 nt   +upstreamnt  +downstreamnt
gtggccgcggcggccgctctcgtctccaccgccgtcctcgtcctgccccagtcggcgacg
gccgccgagacctcccccatcggtttcggcgccgggacgaccgggggcggcggcgcctcc
gcggtcaccgtctccacgctcgccgccttcaagagcgccgtcacgggtgactcggccaag
gtgatccgcgtcagcggcctgatctcactgagcggtcaggtggacatcggctccaacacg
acggtgctgggcgtgggttcgtcctcggggttcaccggcggcggcctgcggatcaaggaa
gagaccaacgtcgtcgtccgcaatctgaacatcagcaagccgctcgcgcccgccgacgga
atcacggtccaggagtccacaaaggtgtggatcgaccacaactccttctcggcggaccgc
acgcacgacaaggactactacgacggtctgctggacatcaaccacggctcggaccatgtg
acggtgtcctggaacaccttcaaggagcacttcaagggctcgctcgtcggccacagcgac
aacaacgcctccgaggacaccgggcacctgagggtgacgtaccaccacaaccacttcagc
aacgtctactcacgcatccccagcctgcgcttcggcaccgggcacttctacaacaactac
gtggacggcgccgagaccgcctgccactcgcgcatgggcgcccagatgctcgtggagaac
aacgtcttccgcaacacaggagtcgcggtcaccacgaaccgcagcagtgacgtggacggc
tacgccaatctgcgcggcaacgacctcggtggggccgccaccgagatctcccggacgggc
agcttcaccgccccgccgtacggctacagcgccgagcccgcctcgtccgtcgtcgcctcg
gtcacctcgggcgccggcgccggaaagctctga

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