Streptomyces graminofaciens: SGFS_026880
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Entry
SGFS_026880 CDS
T09325
Name
(GenBank) S1 RNA binding domain protein
KO
K06959
protein Tex
Organism
sgrf
Streptomyces graminofaciens
Brite
KEGG Orthology (KO) [BR:
sgrf00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
SGFS_026880
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
HHH_3
Tex_N
HHH_9
S1
HHH_7
T2SSK
S1_RRP5
YqgF
HHH_6
Motif
Other DBs
NCBI-ProteinID:
BBC31394
LinkDB
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Position
3007287..3009680
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AA seq
797 aa
AA seq
DB search
MTTPGSIEVGSIEGRIAEELGVRERQVKAAVELLDGGSTVPFIARYRKEATEMLDDAQLR
TLEERLRYLRELEERRAAILDSVREQGKLTPEVEAQIRGAETKARLEDIYLPFKPKRRTK
AQIAREAGLEPLAEGLLGDPTVEPLAAAAAFVDAEKGVADPQAALDGARAILTERFSEDA
DLIGELRERMWVRGRLAAKVRDGKEEAGAKFADYFDFSEPFTDLPSHRILAMLRGEKEDV
LDLVLEPEEPSEQPGPSSYEGIVASRFKIAERGRPGDKWLTDTVRWAWRTRILVHLGIDL
RLRLRTAAEDEAVNVFAANLRDLLLAAPAGTRATLGLDPGFRTGVKVAVVDATGKVVATD
VIYPHVPANKWDEAIAKLARLAKEHAVELVAIGNGTASRETDKLAGELITKHPELNLTKV
MVSEAGASVYSASAFASQELPGMDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHD
LSEVKLSRSLDAVVEDCVNGVGVDVNTASAPLLARVSGISSGLAENIVAHRDSNGPFSSR
SQLKNVARLGPKAYEQCAGFLRIRGGSDPLDASSVHPEAYPVVRRMVKSAGSEVAALIGN
TGVLRSLRANDFVDETFGLPTVTDILKELEKPGRDPRPAFKTATFKDGVEKISDLVSGMV
LEGVVTNVAAFGAFVDVGVHQDGLVHVSAMSKTFVKDPRDVVKPGDIVKVKVLDVDIPRK
RISLTLRLDDEAAPQAQGQGQQGGGSRPQRGSRAPQQQSRQGRGGGGGARQTSAPAPGNS
AMADALRRAGLVDPKRR
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
gtgacgacacccgggtccatcgaagtagggtccatcgaaggcaggatcgccgaggagctc
ggcgtacgggagcggcaggtgaaggccgcggtggagctgctcgacggcggttcgaccgtg
cccttcatcgcccgctaccgcaaggaagcgaccgagatgctcgacgacgcgcagctgcgc
acgctcgaggagcggctgcgctatctgcgggagctggaggagcgccgggcggcgatcctc
gactcggtgcgcgagcagggcaagctgacgccggaggtcgaggcgcagatccgcggtgcc
gagaccaaggcgcggctggaggacatctacctcccgttcaagccgaagcgtcggacgaag
gcgcagatcgcccgcgaggccgggctggagccgctcgccgagggactgctcggcgacccg
accgtcgagccgctggccgccgccgcagcgttcgtggacgccgagaagggcgtcgccgac
ccgcaggccgcgctggacggcgcccgcgcgattctcaccgagcggttctcggaggacgcc
gacctgatcggtgagctgcgcgagcgcatgtgggtgcgcgggcggctggccgccaaggtg
cgggacggcaaggaggaggcgggcgccaagttcgccgactacttcgacttctccgagccg
ttcaccgacctgccctcgcaccgcatcctcgcgatgctgcgcggtgagaaggaggatgtc
ctcgacctcgtgctggagccggaggagccctccgagcagcccggtccgtcgtcgtacgag
gggatcgtggcgagtcgcttcaagatcgccgagcgcggtcgtcccggcgacaagtggctg
acggacacggtccgctgggcctggcggacccggatcctggtgcacctcggcatcgacctg
cggctgcgcctgcgtacggcggccgaggacgaggcggtcaatgtgttcgcggcgaacctg
cgcgacctgctgctcgccgcccccgccggtacgcgcgcgacgctcggcctcgaccccggc
ttccgtacgggtgtgaaggtggccgtggtcgacgcgaccggcaaggtggtggcgacggac
gtcatctatccgcacgtcccggccaacaagtgggacgaggccatcgccaagctggcgcgg
ctggccaaggagcacgcggtcgaactggtggcgatcggcaacggcacggcgtcccgtgag
acggacaagctcgccggtgaactgatcacgaagcacccggagttgaatctcaccaaggtg
atggtgtccgaggcgggcgcgtcggtgtactcggcgtcggcgttcgcctcgcaggagctg
cccgggatggatgtctcgctgcgtggcgcggtgtcgatcgcgcggcgtcttcaggacccg
ctggccgagctggtgaagatcgacccgaagtcgatcggagtcgggcagtaccagcacgac
ctgtcagaggtgaagctgtcgcggtcgctggacgcggtcgtcgaggactgtgtgaacggc
gtcggtgtcgacgtgaacacggcgtccgcgccgctgctggcccgggtctccgggatttcc
tccgggctcgccgagaacatcgtggcgcaccgcgactccaacggcccgttcagctcgcgt
tcccagctgaagaacgtggcgcggctcgggccgaaggcgtacgagcagtgcgcgggcttc
ctgcggatccggggcgggagcgatccgctggacgcgtccagcgtgcatcccgaggcgtat
cccgtggtgcggcggatggtgaagtcggcgggcagtgaggtcgcggcgctgatcggcaac
acgggtgtgctgcggtcgctgcgggcgaacgacttcgtggacgagacgttcggtctgccg
acggtcacggacatcctgaaggagctggagaagcccgggcgtgacccgcggcccgccttc
aagacggcgaccttcaaggacggcgtcgagaagatctccgacctcgtctccgggatggtg
ctggagggcgtcgtgacgaatgtggcggcgttcggggcgttcgtggacgtcggtgttcat
caggacgggctcgtgcatgtgtcggcgatgtccaagacgttcgtgaaggatccgcgggat
gtggtgaagcccggggacatcgtcaaggtgaaggtgctggatgtcgatattccgcggaag
cggatctctctgacgctgcggctggacgacgaggcggcgcctcaggctcaggggcaagga
cagcaggggggtggctcgcggcctcagaggggttcgcgggcgcctcagcagcagtcccgg
caggggcgtggtgggggcggtggggctcggcagacttcggcgccggcgccgggaaacagt
gcgatggctgatgcgttgcggcgggcggggttggtggatcccaagcggcggtga
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