Streptomyces graminofaciens: SGFS_028320
Help
Entry
SGFS_028320 CDS
T09325
Name
(GenBank) Alpha-mannosidase
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
sgrf
Streptomyces graminofaciens
Pathway
sgrf00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
sgrf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
SGFS_028320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sgrf04131
]
SGFS_028320
Enzymes [BR:
sgrf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
SGFS_028320
Membrane trafficking [BR:
sgrf04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
SGFS_028320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Glyco_hydro_38C
Alpha-mann_mid
Glyco_hydro38C2
Ams1-like_1st
SCAN
Glyco_hydro_57
Motif
Other DBs
NCBI-ProteinID:
BBC31538
LinkDB
All DBs
Position
complement(3171341..3174388)
Genome browser
AA seq
1015 aa
AA seq
DB search
MHDERRRIEERVERVHTQRIQPAIYAATVPFEVEAWQAPGEPVPFAEAAAASYAPFAMDT
PWGPPWGTTWFRMRGRVPAEWAGKRVEAVIDLGFTGDWPGNQAEALVHLTDGTPLKAVNP
LNQYVAIANPATGGEEIDYLVEAASNPDILADNFSKITHLGDILTAGDKPIYVFRRADIA
VLDEEVWHLDLDLQVLRELMVHLGEHDPRRHEILHALDRAMDAVDLDDISGSATAVREVL
APVLARPAHASAHTISGVGHAHIDSAWLWPIRETKRKTSRTFSNVTSLADEYEDFIFACS
QAQQYEWVRDNYPQVWARIQQSVKKGQWAPVGGMWVEADGNLPGGEAMARQLIHGKRFFI
EHFGIETKGVWLPDSFGYTAAYPQLAKLAGNDWFLTQKISWNQTNKFPHHTFWWEGIDGT
RIFTHFPPIDTYNARFSGEEMDRAVRNYSEKGGGTRSLAPFGWGDGGGGPTREIMERARR
LADLEGSPKVVVEHPDDFFKAARDEYEDAPVWNGELYLELHRATYTSQARTKQGNRRSEH
KLREAELWATTAALHAPGYAYPYEKLDRLWKTVLLHQFHDILPGSSIAWVHREAEAEYAR
VAKELEELTAEAVAALGAGEARVFNAGPSDRSEVVRTASGAPVYVRVPANGSAPLTASEP
PHPVTVSGRVLDNGLVRVEIAEDGTLSSVRDLKAGREVLGDKGNLLRLHTDLPNYWDAWD
IDKHYKNRYTDLLEPSSITVVEEDPLIGAIRVERAFGKGSRITQTITLRAGSPRVDFETD
IDWHEAEKILKAAFPVDVRAAHSSAEIQFGHVQRPTHTNTTWEAARFEVSGHRWVHVGEP
GYGVAVINDSTYGHDVSRTVREDGGTTTTVRLSLVRAPRIPDPEADQGSHRFTYSLLPGA
TIGDAVAEGYALNLPLRVADAAGAPAPVVSVEGEGVTVEAVKLADDASGDVVVRLYESRG
GRASGVLRTGFPLAGAQVTDLLERPLAEAATDGDGVPVTLRPFEVQTLRLAVGRK
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacgaacgccgccgcatcgaggaacgcgtcgagcgcgtccacacccagcgcatc
cagcccgcgatctacgccgccaccgtgcccttcgaggtggaggcctggcaggcgcccggc
gagcccgtccccttcgcggaggccgcggccgcctcgtacgcgcccttcgcgatggacacc
ccctggggcccgccgtgggggacgacctggttccggatgcgcggccgggtgcccgccgag
tgggccgggaagcgcgtcgaggcggtcatcgacctgggcttcaccggcgactggcccggc
aaccaggccgaggcgctcgtccacctcaccgacggcaccccgctgaaggcggtcaacccg
ctcaaccagtacgtggcgatcgccaacccggccaccggcggcgaggagatcgactacctc
gtcgaggcggcctccaacccggacatcctcgccgacaacttctccaagatcacccacctc
ggcgacatcctgaccgccggcgacaagccgatctacgtcttcaggcgggccgacatcgcc
gtcctcgacgaggaggtctggcacctcgacctcgacctccaggtgctgcgcgagctgatg
gtccacctcggcgagcacgacccccgccgccacgagatcctgcacgccctggaccgggcc
atggacgccgtggacctggacgacatctccggcagcgcgacggccgtccgcgaggtactg
gccccggtgctggcgcgtcccgcccacgccagcgcccacacgatctccggcgtcggccac
gcgcacatcgactcggcctggctctggcccatccgcgagaccaagcgcaagacgtcccgc
accttctcgaacgtcacgtcgctcgccgacgagtacgaggacttcatcttcgcctgctcg
caggcccagcagtacgaatgggtgcgcgacaactacccgcaggtctgggcccggatccag
cagtcggtgaagaagggccagtgggcgcccgtcggcggcatgtgggtcgaggccgacggc
aacctgcccggcggcgaggccatggcgcgccagctcatccacggcaagcggttcttcatc
gagcacttcggcatcgagaccaagggtgtctggctgccggactccttcggctacaccgcc
gcctacccgcagctcgccaagctcgccggcaacgactggttcctcacccagaagatctcc
tggaaccagaccaacaagttcccccaccacaccttctggtgggagggcatcgacggcacc
cgcatcttcacccacttcccgccgatcgacacctacaacgcccgattcagcggcgaggag
atggaccgcgccgtccggaactactcggagaagggcggtggcacacgctcgctggccccc
ttcggctggggcgacggcggtggcggccccacccgcgagatcatggaacgggcccggcgc
ctcgccgacctcgaaggctccccgaaggtcgtcgtcgaacaccccgacgacttcttcaag
gccgcccgcgacgagtacgaggacgccccggtctggaacggcgagctctacctggagctg
caccgcgccacttacacctcccaggcccgcaccaagcagggcaaccgccgctccgagcac
aagctgcgcgaggccgagctgtgggcgacgacggccgcgctgcacgcccccggctacgcc
tacccctacgagaagctcgaccggctctggaagacggtcctgctccaccagttccacgac
atcctgcccggctcctcgatcgcctgggtgcaccgcgaggcggaggcggagtacgcgcgc
gtcgcgaaggaactggaggagctgacggccgaggcggtcgccgcgctgggcgccggcgag
gcgcgggtcttcaacgccggcccgtccgaccgctccgaagtcgtccgcacggcatcggga
gcaccggtgtacgtgcgggtgcccgccaacggcagcgcacccctgaccgcctccgagccc
ccgcacccggtgacggtctccgggcgtgtcctggacaacggtctggtgagggtcgagatc
gccgaggacggcaccctgtcctccgtacgcgatctgaaggccggccgggaggtcctcggc
gacaagggcaacctgctgcgcctgcacaccgaccttcccaactactgggacgcctgggac
atcgacaagcactacaagaaccgctacacggacctgctggagccctcgtccatcacggtg
gtggaggaggacccgctgatcggagcgatccgtgtggagcgggccttcggcaagggctca
cgcatcacccagaccatcaccctccgtgccggcagcccccgcgtcgacttcgagaccgac
atcgactggcacgaggccgagaagatcctcaaggccgccttcccggtggacgtccgcgcc
gcgcactcctccgccgagatccagttcggccacgtccagcgccccacgcacaccaacacc
acgtgggaggcggcccgcttcgaggtctccggccaccgctgggtgcatgtcggcgagccc
ggctacggcgtcgcggtcatcaacgactcgacctacggccacgacgtctcccgcacggtc
cgcgaggacggcggtacgaccaccacggtccgcctcagcctggtccgcgccccgcgcatc
ccggacccggaggccgaccagggcagccaccgcttcacgtactccctgcttcccggtgcg
acgatcggcgacgcggtggcggagggctacgcgctcaacctgccgctgcgtgtcgcggac
gcggcgggcgcaccggcgccggtggtctcggtggagggcgagggcgtgacggtcgaggcg
gtcaagctggccgacgacgcctcgggcgatgtggtggtgcgcctgtacgaatcgcgcggc
ggccgggcgtcgggcgtgctgcgcacgggcttcccgctggccggggcccaggtcacggac
ctgctggaacgcccgctggcggaggcggcgaccgacggggacggtgtgccggtcacgctg
cgccccttcgaggtgcagacgctgaggctggccgtgggcaggaagtga
DBGET
integrated database retrieval system
