KEGG   Streptomyces graminofaciens: SGFS_028960
Entry
SGFS_028960       CDS       T09325                                 
Name
(GenBank) DNA-binding helix-turn-helix protein
Organism
sgrf  Streptomyces graminofaciens
SSDB
Motif
Pfam: WD40 WD40_Prp19 nSTAND1 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd WDR55 EIF3I WD40_MABP1-WDR62_2nd ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_EML Beta-prop_EIPR1 Beta-prop_WDR19_1st NBCH_WD40 Beta-prop_TEP1_C Ge1_WD40 Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_RIG_2nd Cytochrom_D1 Beta-prop_DCAF4 RMC1_N PD40 Beta-prop_WDR35_TULP_N Nbas_N HTH_31 Beta-prop_DCAF12 Beta-prop_HPS5 PROPPIN HTH_3 Beta-prop_SPT8 Beta-prop_NUP159_NUP214 DUF7165 HTH_25 HTH_26 HTH_19 Beta-prop_Nup120_160 AAA_22
Other DBs
NCBI-ProteinID: BBC31602
LinkDB
Position
complement(3249544..3253446)
AA seq 1300 aa
MGDALGEPLYGDRTDHRNERDQAAPTTRSFPAQLRRLRQERGLSLTDLARQTHYSKGYLS
KIETGTKRATVDVARLCDQVLCADGELLRLVQQQPSSPEDVGRAESGGPEGQADVACPYR
GLSAFTPQDAEWFFGRERATAALVERVFARVGSGPLMLVAPSGAGKSSLLNAGLVTALRR
GDFPMPGADRWPVVPLTPTSRPLDELLERTAKAVGGDLGITVDDVRRNPDALLDAVRAMA
DDPSPATAGDRRPPPPRPVLIVDQFEELFTLCTDAEERRAFVRVLCTLATARSAERAHDP
AVVVLGMRADFTGNCLDHPELTPVLTDGLFVLSPMTVAELRESITRPAELAGVTLEAGLV
PLLLRDAGLSDEPGTTAHSDDTPSGALPLISHALLATWQRRDKSALTVAGYERAGGIRGA
IARTAESVFAQLYPAEQKTIRRVLSRLVHVADGTGATRRRMSRAALMAQLADADGAAAAL
DAFVRARLITLDSDTVEITHEALLHAWPRLRDWIHADRAGLLLHQQLAHAAAEWERENRD
PSALYRGTRLDTARAWADELEGWSRLSSGEEEFLRAGQAEEDGRRAQARRQVRLRQGMLA
TLAVLLGLALTAGALAYQQRAGALDQERIARSQALAVRSASLAGGRPEASMLLAEEAYRA
GATAEARGALLSTQSQPFSARLGGHTGPVNAVAFAPDNRSLATASSDGTVTLRRVSDHRR
TATFPIPGRVRSVAFSPDGRTLAATSTDGPVSLWDIASHRRKALLSASTKGSRAVAFDPR
GRRLAVATADGTVQLWDTGRTTRLAASRTGHKGTLNALAYAKNGRALVSAGADRTVRVWD
SARLRRLAVLEGHSDEVLGAALSPDGRQVASGGIDRTVRLWDVRSGRQTATFTGSSDDIN
AVTYTPDGSTVVGAVGDGTTRLWDVRSGRQTATLAGHTDYVQGVAVSSDGALLATAGFDQ
SVVLWKLGGPVLTARPFTEVWQVAYSPDGKLLATADADHAVRLWDARTHKLLKSLQGHTE
TVFSVAFSPDGRTLASAGSDGTVRLWDVPGRKPLDTLTGHAGEVFSVAFSPDGRTLASAG
ADRTVRLWDVAGRTQLAKLTGHKDFVNDVAFSRDGRTLASASDDLTVRLWDVSERRRSAT
LRGHTGAVRGVAFSPDGRTLATSGNDGTVRLWDVRAHRFEAALTGHTGSARGIAFSPDGR
TLASSGNDRTVRLWDVPGRRLWATLTGHTNAVWGVDFAPDGRTVASSSTDGTVRLWDLDP
RARLTVICRLRAGMGAREREALLPDLPVSPEGACGSGSRG
NT seq 3903 nt   +upstreamnt  +downstreamnt
atgggggacgccttgggcgagccgctgtacggagatagaacagaccaccggaacgaacgg
gaccaggccgcgccgaccacgcggtccttccccgcccaactgagaagactgaggcaggaa
cgcgggctgtcgctcaccgacctggcccgtcagacgcactacagcaagggctacctcagc
aagatcgagaccggtacgaagcgcgcgaccgtcgacgtcgcccggctctgcgaccaagtg
ctgtgcgccgacggcgagttgctgcggctggtgcagcagcagccgtcgtcgccggaagac
gtcggccgggccgagtccggcggccccgaagggcaggccgacgtcgcctgtccgtaccgc
ggtctgtcggcgttcaccccgcaggacgcggagtggttcttcggacgggagcgggcgacg
gccgcactcgtcgagcgggtcttcgcccgggtcgggagcggaccgctgatgctggtcgcc
ccctcgggcgcgggaaagtcgtccctgctcaacgccggtctcgtcaccgccctgcggcgc
ggcgacttccccatgcccggggccgaccgctggccggtggtgcccctcacgcccacctcg
cgcccgctggacgaactgctggaacgcaccgcgaaggcggtgggcggcgacctcggcatc
accgtggacgacgtgcggcgcaaccctgacgcgctgctcgacgccgtacgcgcgatggcg
gacgatccgtcacccgcgaccgccggggaccggcggccgccgcccccgcgacccgtcctg
atcgtcgatcagttcgaggagctgttcaccctgtgcaccgacgcggaggagcggcgcgcc
ttcgtccgggtgctctgtacgctcgcgaccgcgcgatcggcggagcgcgcgcacgacccc
gccgtggtggtgctcggcatgcgggccgacttcaccggcaactgtctggaccaccccgaa
ctcaccccggtcctcaccgacggactcttcgtcctctccccgatgaccgtggcggaactg
cgagaatcgatcacacgtccggcggaactcgccggagtcaccctcgaagcgggcctcgtg
cccctgctgttgcgcgacgccggcctgagcgacgagcccggtacgacggcgcacagcgac
gacaccccctccggcgcccttcctctcatctcccacgccctgctcgccacctggcagcgc
cgcgacaagtccgcgctgaccgtcgccgggtacgagcgggccggcggcatccggggcgcc
atcgcccgcaccgccgaaagcgtgttcgcccagctgtacccggccgagcagaagaccatc
cggcgcgtcctgtcccggctggtccatgtcgccgacggcaccggcgcgacccggcgccgg
atgagccgcgccgccctgatggcacagctcgccgacgcggacggcgccgccgccgcgctc
gacgccttcgtacgggcccggctgatcaccctcgacagcgacaccgtggagatcacccac
gaggccctgctgcacgcctggccccgactgcgcgactggatccacgccgaccgggcaggc
ctgctgctccaccagcaactcgcccacgccgccgccgaatgggagcgcgagaaccgcgac
ccgtccgccctctaccggggcacccgactggacaccgcacgggcgtgggccgacgagctg
gagggctggagccggctcagttccggtgaggaggagttcctgcgggccgggcaggcggag
gaggacggccgcagggcccaggccagacgccaggtccggctgcgccaaggcatgctggcc
acgctcgccgttttgttgggcctcgccctgaccgccggcgcccttgcctaccagcagcgc
gcgggcgccctcgaccaggaacggatcgcccgctcccaggccctcgccgtacgctccgcg
tccctcgccgggggccggccggaggcgtcgatgctgctcgccgaggaggcctaccgcgcc
ggagccaccgccgaggcgcgcggcgccctgctcagcacccagtcgcagcccttctccgcc
cggctcggcggacacaccgggccggtcaacgcggttgccttcgcgccggacaaccgttcg
ctggcgacggccagttcggacggcacggtcaccctgcggcgcgtctccgaccaccgcagg
accgccacgttccccatccccggacgcgtccgctcggtcgccttcagccccgacggccgt
acgctcgcggcgacctccacggacgggcccgtgagcctgtgggacatcgcgagccaccgc
aggaaggcgctgctctccgcgagtacgaaggggtcccgggcggtcgccttcgacccgcgc
ggacgccggctcgccgtcgcgaccgccgacggcacggtccagctgtgggacaccggccgg
accacccggctcgccgcctcccggaccggtcacaagggcaccctcaacgcgctggcgtac
gcgaagaacggccgggccctcgtctcggcgggcgccgaccggaccgtacgggtctgggac
agtgcccgactccgccgactcgccgtcctagagggacactccgacgaggtgctgggcgcg
gcgctctcaccggacggccgccaggtcgcctccgggggcatcgaccggaccgtacggctg
tgggacgtgcgcagcgggcggcagacggcgacgttcacggggagcagcgacgacatcaac
gccgtcacgtacacgcccgacggcagcacggtcgtcggcgcggtcggcgacggcacgacc
cggctgtgggacgtgcgcagcggccggcagaccgccacgctcgccggtcacaccgactac
gtccagggcgtggccgtgtcctccgacggcgcgttgctggcgacggccggcttcgaccag
tccgtcgtcctgtggaagctgggcggaccggtactgacggcccgtccgttcaccgaggtc
tggcaggtcgcgtacagccccgacggcaaactgctggccaccgccgacgccgaccacgcc
gtacggctgtgggacgcgaggacgcacaagctcctcaagtcgctgcagggccacaccgag
accgtcttctcggtggctttctcgcccgacgggcggaccctggcgtcggcgggctcggac
ggcacggtccggctgtgggacgtgcccggacgcaagccgctcgacacgctgaccggccac
gcaggggaggtcttctccgtcgcgttctcgcccgacggccggaccctcgcctccgcgggc
gccgaccgtacggtccggctgtgggacgtggccgggcgcacccagctggcgaagctgacc
ggccacaaggacttcgtcaacgacgtcgccttcagccgcgacggccggaccctcgccagc
gcgagcgacgacctgaccgtacggctgtgggacgtctccgagcgccgccggtcggccacg
ctcaggggtcacacgggcgcggtccgcggcgtcgccttcagccccgacggccgcaccctc
gccaccagcggcaacgacggcacggtccgcctgtgggacgtccgcgcacaccgcttcgag
gcggccctgaccggccacaccggctccgcgcgcggcatcgcgttctcccccgacggccgt
acgctcgccagcagcggcaacgaccgtacggtccgcctgtgggacgtgcccgggcgccgg
ctgtgggccaccctgaccggtcacacgaacgcggtgtggggcgtggacttcgcccccgac
gggcgcacggtggccagcagcagcaccgacggcacggtacggctgtgggacctcgacccc
cgcgcccggctgacggtgatctgtcggctgcgtgcgggcatgggggcgcgggaacgcgag
gcgctgctgccggatctgccggtgtcgccggagggggcatgtgggtcaggcagtaggggc
tag

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