Streptomyces graminofaciens: SGFS_029370
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Entry
SGFS_029370 CDS
T09325
Name
(GenBank) Long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sgrf
Streptomyces graminofaciens
Pathway
sgrf00061
Fatty acid biosynthesis
sgrf00071
Fatty acid degradation
sgrf01100
Metabolic pathways
sgrf01212
Fatty acid metabolism
sgrf02024
Quorum sensing
sgrf04146
Peroxisome
Module
sgrf_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sgrf00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SGFS_029370
00071 Fatty acid degradation
SGFS_029370
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SGFS_029370
09145 Cellular community - prokaryotes
02024 Quorum sensing
SGFS_029370
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sgrf01004
]
SGFS_029370
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sgrf04147
]
SGFS_029370
Enzymes [BR:
sgrf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SGFS_029370
Lipid biosynthesis proteins [BR:
sgrf01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SGFS_029370
Exosome [BR:
sgrf04147
]
Exosomal proteins
Exosomal proteins of breast milk
SGFS_029370
Exosomal proteins of breast cancer cells
SGFS_029370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
BBC31643
LinkDB
All DBs
Position
3307512..3309338
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AA seq
608 aa
AA seq
DB search
MREFTNPSLASAPPVGGLADVVFEHAQDDPLYIALGRKDEHGEWRDVTCAEFRDEVLALA
KGLLSQGIRFGDRVAIMCRTRYEWTLFDYALWTIGAQVVPIYPTSSAEQVFWMLYDAQCT
AAMVEHEDHAMTIATVIDRLPQLQRLWQLDVGAVQELYESGAHLDDDVVHRHRKAVTPDS
IATIIYTSGTTGRPKGCVISHGSFMFEAETVIERWSPLFKSRRGDEAATLLFLPLAHVFG
RMVQVAGIRGKVKFGHQPQLNAAVLLPDLAAFQPTFFLAVPYIFEKVFNAARRKAEREGR
AGPFEKAVEVAVKYADAMEAKAWGIGPGPSAGLRMQHQFFDKVVYAKIREAMGGRIKYAM
SGGSAMDRRLGLFFAGAGVHIFEGYGLTECTAAATANPPERTRYGTVGQAIPGMTVHIAD
DGEIWLRGPNVFQGYLNNPKATDETLQDGWLATGDLGSLDEDGYLTITGRKKEILVTSGG
KSVSPAILEERVRDHPLVAQCIVVGNDRPYIAALVTLDGEAVEHWLQMHDKQKLSPAELV
RDPELETEVRRAVVAANTLVSQAESIRTFRILAHQFTEEHGLLTPSLKLKRKAIEKTYAK
EVEALYRA
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgagttcaccaacccttcgttggcgtcggcgccgccggtgggcggcctggccgac
gtcgtcttcgagcacgcccaggacgaccccctgtacatcgccctcggccgcaaggacgag
cacggcgagtggcgcgatgtgacctgtgccgagttccgtgacgaggtgctggcgctggcc
aaggggctgctgtcgcagggcatccggttcggcgaccgggtcgccatcatgtgccgtaca
cgctacgagtggaccctcttcgactacgccctgtggaccatcggcgcgcaggtcgtcccg
atataccccacgtcgtcggccgagcaggtcttctggatgctgtacgacgcgcagtgcacg
gcggccatggtcgagcacgaggaccacgcgatgaccatcgcgacggtcatcgaccgcctg
ccccagttgcagcggctgtggcagctggacgtgggcgcggtgcaggagctgtacgagtcg
ggggcgcatctcgacgacgacgtggtgcaccgccaccgcaaggcggtcacgcccgactcg
attgcgacgatcatctacacgtccggcaccacgggccgccccaagggctgtgtgatctcg
cacggcagcttcatgttcgaggcggagaccgtcatcgaacgctggtcgccgctgttcaag
tcccgcaggggcgacgaggcggcgaccctgctgtttctgcccctcgcgcatgtcttcggg
cggatggtgcaggtcgccgggatccgcggcaaggtcaagttcggacaccagccacagctc
aacgcggccgtgctgctgccggacctcgccgccttccagccgacgttcttcctggccgtg
ccgtacatcttcgagaaggtgttcaacgcggcccggcgcaaggccgagcgggagggcagg
gcggggccgttcgagaaggccgtcgaggtcgcggtgaagtacgcggacgcgatggaggcc
aaggcctggggcatcgggcccggcccgtcggcggggctgcggatgcagcaccagttcttc
gacaaggtcgtctacgccaagatccgggaggcgatgggcggccggatcaagtacgcgatg
tccggcggctccgcgatggaccgccggctcggactgttcttcgcgggcgccggcgtccac
atcttcgaggggtacggcctcaccgagtgcacggcggccgcgaccgccaacccgcccgag
cgcacccgttacggcacggtcggccaggccatccccggtatgaccgtgcacatcgcggac
gacggcgagatctggctgcgcggccccaacgtcttccagggctacctcaacaaccccaag
gccaccgacgagaccctccaggacggctggctcgccaccggcgacctgggctcactcgac
gaggacggctacctcacgatcaccgggcgcaagaaggagatcctggtgacctccggcggc
aagagcgtctcgcccgcgatcctggaggaacgggtgcgcgaccatccgctggtcgcccag
tgcatcgtcgtcggcaacgaccggccgtacatcgcggccctcgtcaccctggacggcgag
gccgtcgagcactggctccagatgcacgacaagcagaaactttccccggccgagctggtg
cgcgaccccgaactggagaccgaggtccggcgggccgtggtcgccgcgaacacgctggtg
tcgcaggccgagtcgatccgcacgttccgcatcctggcccatcagttcaccgaggagcac
gggctgctcacgccctcgctgaagctgaagcggaaggcgatcgagaagacgtacgcgaag
gaggtggaggctctctaccgggcctga
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