Streptomyces graminofaciens: SGFS_030340
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Entry
SGFS_030340 CDS
T09325
Name
(GenBank) DNA-3-methyladenine glycosylase 2
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
sgrf
Streptomyces graminofaciens
Pathway
sgrf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sgrf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SGFS_030340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sgrf03000
]
SGFS_030340
03400 DNA repair and recombination proteins [BR:
sgrf03400
]
SGFS_030340
Enzymes [BR:
sgrf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
SGFS_030340
Transcription factors [BR:
sgrf03000
]
Prokaryotic type
Helix-turn-helix
AraC family
SGFS_030340
DNA repair and recombination proteins [BR:
sgrf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SGFS_030340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
UBA_6
Motif
Other DBs
NCBI-ProteinID:
BBC31740
LinkDB
All DBs
Position
complement(3425813..3427309)
Genome browser
AA seq
498 aa
AA seq
DB search
MYSDVERCVRAVQSKDARFDGWVFTAVLTTRIYCRPSCPAVPPKPENMTFYPSAAACQQA
GFRACKRCRPDSSPGSPEWDQRADLVARAMRLIGDGLVDREGVPGLARRLGYSTRQVERQ
LLAELGAGPLALARAQRAQTARLLIETTPLPMAEITFASGFSSIRTFNDTVREVFALSPS
ELRERAARSAGRRPDVPGTPGVLSLRLPFRAPLNPDNLFGHLAATAVPGVEEWRDGAYRR
TLRLPYGHGIVGLTPQPDHIGCRLTLSDLRDLPVAISRCRRMLDLDADPVAVDEQLRGDP
VLAPLVDKAPGRRVPRTVDEAEFAVRAVLGQQVSTAAARTHAARLVTAHGEPVDDPGGGL
THLFPTPEALAALDPGTLAMPRTRRNTFTTLVRRLADNELHLGVDSDWAETRSRLLALPG
FGPWTADVIAMRALGDPDAFLPTDLGVRRAAKELGLPSTPAALTAHAAAWRPWRAYAVQY
LWATDSHPINFLPGQGRS
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcgatgtcgagcggtgtgtgcgggccgtgcagtcgaaggacgcgcggttcgac
gggtgggtgttcaccgcggtgctcacgacgcggatctactgtcggccgagttgcccggcc
gtgccgccgaagccggagaacatgacgttctacccgagcgcggccgcctgccagcaggcc
gggttccgggcgtgcaagcggtgccgcccggacagcagcccgggctcgcccgagtgggac
cagcgggccgacctggtggcccgcgccatgcggctcatcggggacgggttggtggaccgc
gagggcgtgccggggctcgcgcggcggctcggctacagcacccggcaggtggagcggcaa
ctcctcgccgagctgggcgccgggccgctcgcgctcgcccgggcccagcgcgcgcagacc
gcgcggctgctgatcgagacgaccccgctgccgatggcggagatcacgttcgcgtccgga
ttctcctcgatccgcaccttcaacgacaccgtgcgggaggtcttcgcgctctcgccgagc
gagctgcgggagcgggcggcacggtccgccgggcgtcggcccgacgtcccgggcaccccc
ggcgtactgagcctccgcctgcccttcagggccccgctcaaccccgacaacctcttcggc
cacctcgccgccaccgccgtacccggcgtggaggagtggcgcgacggcgcgtaccggcgc
acgctccggctgccgtacgggcacggaatcgtcggcctcactccgcagcccgaccacatc
ggctgccggctcaccctcagcgatctgcgggacctgcccgtggccatcagccgctgccgc
cgcatgctcgatctggacgccgacccggtcgccgtcgacgagcagctgcgcggcgacccg
gtcctcgcgccgctggtggacaaagcgccggggcgccgggtgccgcgtacggtcgacgag
gcggagttcgccgtacgggcggtgctcggccagcaggtgtccacggccgccgcccgcacc
cacgcggcccggctggtcaccgcgcacggcgaacccgtcgacgaccccgggggcggcctc
acccacctcttcccgacccccgaggctctcgcggccctcgaccccgggaccctcgcgatg
ccccgcacccggcggaacacgttcaccaccctcgtccgtcgactcgccgacaacgaactg
cacttgggcgtggacagcgactgggccgagacccgctcccgcctcctcgccctccccggc
ttcggcccctggaccgccgacgtcatcgccatgcgcgccctcggcgaccccgacgccttc
ctccccaccgacctcggagtccgccgcgcggcgaaggagctgggcctgccgtccacaccg
gccgcgctcaccgcacacgcggcggcctggcgcccctggcgggcgtacgcggtccagtac
ctgtgggcgaccgacagccacccgatcaacttccttccaggacaaggacgttcatga
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