Streptomyces graminofaciens: SGFS_033570
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Entry
SGFS_033570 CDS
T09325
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sgrf
Streptomyces graminofaciens
Pathway
sgrf03030
DNA replication
sgrf03430
Mismatch repair
sgrf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sgrf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SGFS_033570
03430 Mismatch repair
SGFS_033570
03440 Homologous recombination
SGFS_033570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgrf03032
]
SGFS_033570
03400 DNA repair and recombination proteins [BR:
sgrf03400
]
SGFS_033570
Enzymes [BR:
sgrf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SGFS_033570
DNA replication proteins [BR:
sgrf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SGFS_033570
DNA repair and recombination proteins [BR:
sgrf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SGFS_033570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DUF6417
Motif
Other DBs
NCBI-ProteinID:
BBC32063
UniProt:
A0ABM7F7X1
LinkDB
All DBs
Position
complement(3806193..3806915)
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AA seq
240 aa
AA seq
DB search
MGWHRQLLIGFDLETTGTDPRESRIVTGAVIEVKDGEPLGRREWLADPGVEIPADAVAVH
GITNARATAEGSPADQVADEIADVLVSYWKTGVPVVAYNAAFDLTLLSAELRRHSLPSLR
ERLGDLDPAPVIDPYTIDRSVDRYRRGKRNLEAVCAEYGVALDSAHDATADALAAARLAR
AIAHRHPKVAALGPADLHRRQIEWYAEWAADFQNFLRRKGDETAVVDGSWPLRELADKTV
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgggttggcaccgacagctgctgatcggcttcgacctggagacgaccgggacggacccg
cgcgagtcgcgcatcgtcaccggcgcggtgatagaggtcaaggacggggagccgctcggc
cgcagggagtggctggccgatccgggcgtggagatcccggccgacgcggtcgctgtgcac
ggcatcacgaacgcccgcgctaccgccgagggcagtccggccgaccaggtcgccgacgag
atcgcggacgtcctcgtctcgtactggaagaccggcgtcccggtggtggcgtacaacgcg
gccttcgacctcaccctgctctcggcggagttgcgccgtcattccctgccgtccctgcgt
gaacgcctcggcgacctggaccccgctccggtcatcgacccgtacacgatcgaccgctcc
gtcgaccgctaccgccggggcaagcgcaacctggaagcggtctgcgccgagtacggcgtc
gccctcgactcggcccacgacgccacggccgacgccctggccgcggcccgcctcgcccgc
gcgatagcccaccgccaccccaaggtcgcggccctcggcccggcggacctgcaccgccgc
cagatcgagtggtacgccgagtgggcggcggacttccaaaacttcctccgccgcaagggc
gacgaaacagcggtggtggacggctcgtggcccctgcgggaactggcggacaagacggtc
tga
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