Streptomyces graminofaciens: SGFS_036430
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Entry
SGFS_036430 CDS
T09325
Name
(GenBank) DNA topoisomerase
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
sgrf
Streptomyces graminofaciens
Brite
KEGG Orthology (KO) [BR:
sgrf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgrf03032
]
SGFS_036430
03400 DNA repair and recombination proteins [BR:
sgrf03400
]
SGFS_036430
Enzymes [BR:
sgrf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SGFS_036430
DNA replication proteins [BR:
sgrf03032
]
Prokaryotic type
DNA Topoisomerases
SGFS_036430
DNA repair and recombination proteins [BR:
sgrf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SGFS_036430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
FliT
ZT_dimer
Motif
Other DBs
NCBI-ProteinID:
BBC32349
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Position
4130384..4132840
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AA seq
818 aa
AA seq
DB search
MARRSTKTPPPDDAFEERILDIDVVDEMQGSFLEYAYSVIYSRALPDARDGLKPVHRRIV
YQMNEMGLRPDRGYVKCARVVGEVMGKLHPHGDSSIYDALVRLAQPFSMRLPLVDGHGNF
GSLGNDDPPAAMRYTECRMADATSLMTESIEENTVDFSPNYDGQEQEPVALPAAFPNLLV
NGSSGIAVGMATNMPPHNLSEVIAAARHLIRYPNADLDTLMRYVPGPDLPTGGRIVGLSG
VRDAYETGRGTFKIRATVAVETVTARRKGLVVTELPFTVGPEKVIAKIKDLVGSKKLQGI
ADVKDLTDRQHGLRLVIEIKNGFVPEAVLEQLYKLTPMEESFGINNVALVDGQPLTLGLK
ELLEVYLDHRFDVVRRRSEFRRGKRRDRLHLVEGLLTALVDIDEVIRLIRSSENSAQAKE
RLMERFSLSDIQTQYILDTPLRRLTKYDRIELESEKDRLNAEIAELTRILESDTELRKLV
SAELAAVAKKFGTERRTVLLEAAGTQTAAVPLQVADDPCRVLLSSTGLLARTAGIEPFAE
DEDGKRTKHDVIVSAVPATARGEVGAVTSTGRLLRLNVVDLPQLPETAAAPNLSGGAPLA
EFLTLEDGETVVCLTTLDESSPGLAIGTEQGVVKRVVPDYPSNKEELEVITLKEGDRIVG
AVELRTGEEDLVFITDDAQLLRYQASQVRPQGRPAGGMAGVKLTEGAKVISFTAIDPAAD
AVVFTVAGSRGTLDDSVQTTAKLTPFDQYPRKGRATGGVRCQRFLKGEDCLSFAWAGPTP
ARAAQKTGMPADLPEMDPRRDGSGVSLQKTVWSAAGPV
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggcccgccgcagcacgaagaccccgccgcccgacgacgcgttcgaggagcggatcctc
gacatcgacgtcgtcgacgagatgcagggctccttcctggagtacgcgtactcggtcatc
tactcccgagccctgcccgacgctcgcgacggtctgaagccggtacaccgccggatcgtc
taccagatgaacgagatgggcctgcgccccgaccgcggctatgtgaagtgcgcgcgcgtc
gtcggcgaggtcatgggtaagttgcacccgcacggagactcgtcgatctacgacgccctg
gtgcgcctcgcccagccgttctccatgcgcctgcccctggtcgacggccacggcaacttc
ggctcgctgggcaacgacgacccgccggccgccatgcggtacaccgagtgccggatggcc
gacgcgacgagcctgatgacggagtcgatcgaggagaacacggtcgacttctccccgaac
tacgacggccaggagcaggagccggtggcgctgcccgccgccttcccgaacctgctggtc
aacggctcgtcgggcatcgccgtcggcatggcgaccaatatgccgccgcacaacctgagc
gaggtcatcgcggccgcccgccacctcatcagatatccgaacgccgacctggacaccctg
atgcggtacgtcccgggccccgacctgcccacgggcggccggatcgtcggcctctccggc
gtccgggacgcctacgagacgggccgcggcacgttcaagatccgcgccacggtggcggtg
gagacggtcacggcgcgccgcaagggcctggtcgtcacagaactgccgttcaccgtcggc
ccggagaaggtgatcgccaagatcaaggacctggtcggttcgaagaagctgcagggcatc
gccgacgtcaaggacctcaccgaccgccagcacggcctgcgcctggtcatcgagatcaag
aacggcttcgtcccggaagccgtcctggagcagctctacaagctgacgccgatggaggag
tccttcggcatcaacaacgtggcgctggtcgacggccagcccctcacgctcggcctcaag
gagctgctcgaggtctacctcgaccaccgcttcgacgtcgtacgccgccgctcggagttc
cgccgcggcaagcggcgggaccgtctgcacctggtcgagggcctgctcacggcgctggtg
gacatcgacgaggtcatccggctgatccgctccagcgagaactccgcgcaggccaaggag
cgcctgatggagcgcttctccctgtcggacatccagacgcagtacatcctggacaccccg
ctgcgccgcctcaccaagtacgaccgtatcgagctggagtcggagaaggacaggctcaac
gcggagatcgcggagctgacccgcatcctggagtcggacacggagctgcgcaagctcgtg
tcggccgaactggccgcggtggccaagaagttcggcacggagcgtcgtacggtcctgctg
gaggcggcgggcacccagacggccgcggtcccgctccaggtggcggacgacccgtgccgg
gtgctgctgtcctcgacgggtctgctggcccgtacggcgggcattgagcccttcgcggag
gacgaggacggcaagcgcaccaagcacgacgtcatcgtctccgcggtgccggcgacggcg
cgcggcgaggtgggcgcggtgacgtccacgggccgcctgctgcggctgaacgtggtcgac
ctgccgcagctgccggagacggcggcggccccgaacctgtcgggcggcgccccgctcgcc
gagttcctcaccctcgaggacggcgagacggtggtctgtctgacgacgctcgacgagtcg
tcgcccggtctggccatcggcaccgagcagggtgtcgtcaagcgtgtggtccccgactac
ccgtccaacaaggaggagttggaggtcatcacgctcaaggagggcgaccggatcgtcggc
gcggtcgagctgcgcacgggcgaggaggacctggtcttcatcacggacgacgcccagctg
ctgcgctaccaggcctcacaggtccgcccgcagggccgcccggccggcggtatggccggc
gtcaagctcaccgagggcgcgaaggtgatctccttcacggcgatcgacccggccgcggac
gcggtggtcttcaccgtggcgggctcccgcggcacgctggacgactccgtccagaccacc
gccaagctcacccccttcgaccagtacccgcgcaagggccgcgccacgggcggcgtccgc
tgccagcggttcctgaagggcgaggactgcctgtcgttcgcctgggccggtcccaccccc
gcccgcgccgcgcagaagaccggcatgccggcggacctcccggagatggacccgcgccgc
gacggctcgggcgtgtccctgcagaagacggtgtggtcggcggccgggccggtgtga
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