Streptomyces graminofaciens: SGFS_036530
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Entry
SGFS_036530 CDS
T09325
Name
(GenBank) RNA polymerase sigma factor SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
sgrf
Streptomyces graminofaciens
Pathway
sgrf02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sgrf00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SGFS_036530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgrf03021
]
SGFS_036530
Transcription machinery [BR:
sgrf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SGFS_036530
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HC2
Sigma70_r1_1
CDC27
Motif
Other DBs
NCBI-ProteinID:
BBC32359
LinkDB
All DBs
Position
complement(4144795..4146330)
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AA seq
511 aa
AA seq
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MSASTSRTLPPEIAESVSVMALIERGKAEGQIAGDDVRRAFEADQIPATQWKNVLRSLNQ
ILEEEGVTLMVSAAEPKRTRKSVAAKSPAKRTATKTVAAKTVTTKKAPAATAPAAPAVDA
STEDAAPAKKAAAKKTTTAKKAVAKKTVAKKTAAKKTTAGKDDAEVLEDEVIEDIKPGEE
EEEGAENKGFVLSDDDEDDAPAQQVAVAGATADPVKDYLKQIGKVPLLNAEQEVELAKRI
EAGLFAEDKLSNADKLAPKLKRELEIIAEDGRRAKNHLLEANLRLVVSLAKRYTGRGMLF
LDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVIN
KLARVQRQMLQDLGREPTPEELAKELDMTPEKVIEVQKYGREPISLHTPLGEDGDSEFGD
LIEDSEAVVPADAVSFTLLQEQLHSVLDTLSEREAGVVSMRFGLTDGQPKTLDEIGKVYG
VTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggccagcacatcccgtacgctcccgccggagatcgccgagtccgtctctgtcatg
gcgctcatcgagcggggaaaggctgaggggcagatcgccggcgacgatgtgcgtcgggcc
ttcgaagccgaccagatcccggccactcagtggaagaacgtactgcgcagcctcaaccag
atcctcgaggaagagggtgtgacgctgatggtcagtgccgcggagcccaagcgcacccga
aagagcgtcgcagcgaagagtcccgccaagcgcaccgccaccaagacggtcgcggcgaag
acggtgaccaccaagaaggcccccgcagccaccgcccccgcggcgcctgcggtcgacgcc
tccaccgaggacgccgcgcccgccaagaaggcggcggcgaagaagacgacgaccgccaag
aaggcggtcgcgaagaagaccgtcgccaagaagacggcggccaagaagacgaccgccggc
aaggacgacgccgaggtcctcgaggacgaggtcatcgaggacatcaagcccggcgaagag
gaagaggagggggccgagaacaagggcttcgtcctctccgacgacgacgaggacgacgcg
cccgcccagcaggtcgccgtggccggtgccaccgccgaccccgtcaaggactacctcaag
cagatcggcaaggtccccctgctcaacgccgagcaggaggtcgagctcgccaagcgcatc
gaggccggtctgttcgccgaggacaagctgtcgaacgccgacaagctggcgccgaagctc
aagcgcgagctggagatcatcgccgaggacggccgccgcgccaagaaccacctcctggag
gccaacctccgtctggtggtctccctggccaagcgctacaccggccgcggcatgctcttc
ctggacctcatccaggagggcaacctcggtctgatccgcgcggtcgagaagttcgactac
accaagggctacaagttctccacgtatgccacctggtggatccgccaggcgatcacccgc
gccatggccgaccaggcccgcaccatccgtatcccggtgcacatggtcgaggtcatcaac
aagctcgcgcgtgtgcagcgccagatgctccaggacctgggccgcgagcccaccccggag
gagctggccaaggaactcgacatgacccccgagaaggtcatcgaggtccagaagtacggc
cgcgagcccatctcgctgcacaccccgctgggcgaggacggcgacagcgagttcggtgac
ctcatcgaggactccgaggccgtcgtcccggccgacgcggtcagcttcacgctcctgcag
gagcagctgcactccgtcctcgacaccctctccgagcgcgaggcgggcgtcgtctccatg
cgcttcggtctcaccgacggtcagccgaagaccctcgacgagatcggcaaggtgtacggc
gtcacgcgtgagcgcatccgccagatcgagtccaagacgatgtcgaagctgcgccacccg
tcccgttcgcaggtgctgcgcgactacctcgactag
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