Streptomyces graminofaciens: SGFS_037950
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Entry
SGFS_037950 CDS
T09325
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
sgrf
Streptomyces graminofaciens
Brite
KEGG Orthology (KO) [BR:
sgrf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sgrf03009
]
SGFS_037950
Enzymes [BR:
sgrf01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
SGFS_037950
Ribosome biogenesis [BR:
sgrf03009
]
Prokaryotic type
ribosomal protein modification factors
SGFS_037950
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
BBC32501
LinkDB
All DBs
Position
complement(4346711..4348195)
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AA seq
494 aa
AA seq
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MPERRTVALVTLGCARNEVDSEELAGRLEADGWELVEDAEDADVAVVNTCGFVEAAKKDS
VDALLEANDLKGHGRTQAVVAVGCMAERYGKELAEALPEADGVLGFDDYADISDRLQTIL
SGGIHAAHTPRDRRKLLPISPAERQSGAEDVALPGHGAPVDLPEGLAPDSGPRAPLRRRL
DGSPVASVKLASGCDRRCSFCAIPSFRGSFISRRPSDVLNETRWLAEQGVKEIMLVSENN
TSYGKDLGDIRLLESLLPELAEVDGVERVRVSYLQPAEMRPGLIDVLTSTPKVVPYFDLS
FQHSAPAVLRSMRRFGDTDRFLELLDTIRSKAPEAGVRSNFIVGFPGETEADLAELERFL
NGARLDAIGVFGYSDEEGTEAATYENKLDEDVVAERLARISRLAEELVSQRADERVGETV
RVLVESVDGEEGAYGRAAHQAPETDGQVLFTSGEGLSVGLIVEAKVVGTEGVDLVAEPLP
GSLGSPACTEEAAR
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacgccgtaccgtcgcacttgtcactcttggctgcgcccgtaacgaggtggac
tcggaggagctcgcaggccgcttggaggcggacggctgggagctcgtcgaggacgccgag
gacgcggacgtcgcggtcgtcaacacctgtggcttcgtcgaggccgccaagaaggactcc
gtcgacgccctcctcgaggccaacgacctcaagggccatggcagaacccaggccgtcgtg
gcggtgggctgcatggccgagcgctacggcaaggagctggcggaagcgctgcccgaggcc
gacggcgtactcggcttcgacgactacgcggacatctccgaccgcctccagaccatcctc
tccggcggcatccacgccgcccacaccccgcgcgaccggcgcaagctgctgccgatcagc
ccggcggagcggcagtcgggggcggaggacgtggccctgcccgggcacggagccccggtc
gacctgcccgaggggctcgcgcccgactccgggccccgcgcccccctgcgccgccggctc
gacggctcgcccgtcgcctcggtgaagctcgcctccggctgtgaccgccgctgctccttc
tgcgccatcccctcgttccgcggctccttcatctcgcgccggccctcggacgtgctgaac
gagacgcgctggctggccgagcagggcgtcaaggagatcatgctggtctccgagaacaac
acgtcgtacggcaaggacctcggcgacatccgtctgctggagtcgctgctgcccgagctg
gccgaggtcgacggcgtcgagcgggtccgtgtgagctatctccagcccgccgagatgcgg
cccgggctgatcgacgtgctcacgtccacacccaaggtcgtgccctacttcgacctgtcc
ttccagcactccgcccccgcggtgctgcgctcgatgcgccgcttcggcgacaccgaccgc
ttcctggagctgctcgacaccatccggagcaaagcccccgaggccggcgtgcgatccaac
ttcatcgtgggcttccccggcgagaccgaggccgacctcgccgagctggagcgcttcctg
aacggcgctcggctcgacgcgatcggcgtcttcgggtactccgacgaggagggcaccgaa
gcggccacgtacgagaacaagctggacgaggacgtggtcgccgagcgcctcgcgcgcatc
tcgcggctggccgaggaactggtctcgcagcgcgccgacgagcgggtcggcgagaccgtc
cgcgtgctcgtcgagtcggtcgacggtgaggagggcgcgtacggccgcgccgcgcaccag
gcacccgagacggacgggcaggtgctgttcacgagcggcgaaggcctgagtgtcggcctt
atcgtcgaggccaaggtggtcggtacggaaggtgtcgacctggtggccgagccactcccg
ggctcgctcggctcgcccgcatgtactgaggaggcggccagatga
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