Streptomyces graminofaciens: SGFS_039620
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Entry
SGFS_039620 CDS
T09325
Name
(GenBank) Ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
sgrf
Streptomyces graminofaciens
Pathway
sgrf03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sgrf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SGFS_039620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgrf03019
]
SGFS_039620
03009 Ribosome biogenesis [BR:
sgrf03009
]
SGFS_039620
03036 Chromosome and associated proteins [BR:
sgrf03036
]
SGFS_039620
Enzymes [BR:
sgrf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
SGFS_039620
Messenger RNA biogenesis [BR:
sgrf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SGFS_039620
Ribosome biogenesis [BR:
sgrf03009
]
Eukaryotic type
90S particles
RNase
SGFS_039620
Prokaryotic type
rRNA processing factors
SGFS_039620
Chromosome and associated proteins [BR:
sgrf03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
SGFS_039620
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
BBC32668
UniProt:
A0ABM9SBT1
LinkDB
All DBs
Position
complement(4560007..4560831)
Genome browser
AA seq
274 aa
AA seq
DB search
MSDAKKNALRANGGNPSADSTASSHTLLEGRLGYKLESALLVRALTHRSYAYENGGLPTN
ERLEFLGDSVLGLVVTDTLYNTHPDLPEGQLAKLRAAVVNSRALAEVGRGLDLGSFIRLG
RGEEGTGGRDKASILADTLEAVIGAVYLDQGLDAASELVHRLFDPLIEKSSNLGAGLDWK
TSLQELTATEGLGVPEYLVTETGPDHEKTFTAAARVGGVSYGTGTGRSKKEAEQQAAESA
WRAIRSAADERAKQEAATAAEAEAPDTSSDTAPA
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgccaagaagaacgctctccgtgcaaacggaggtaacccgtcggcggacagc
acggcctcgtcccacacgcttctggaagggcggctcgggtacaagctcgagtccgccctt
ctggtgcgcgcgctgacccaccgttcgtacgcgtacgagaacggcggcctgcccaccaac
gagcgcctggagttcctcggggactccgtcctcggcctcgtggtcacggacacgctgtac
aacacccaccccgacctgcccgaaggccagctggccaagttgcgggccgcggtggtcaac
tcgcgtgcgctggcggaggtgggccgtgggctcgacctcggctccttcatccggctcggc
cgcggtgaagagggcacgggcggccgggacaaggcgtccatcctcgccgacaccctcgaa
gcggtgatcggcgccgtctatctcgaccagggcctcgacgccgcgtccgaactggtacac
cgcctgttcgacccgctgatcgagaagtcctcgaacctcggtgccggcctggactggaag
accagcctccaggagctcaccgcgaccgaagggctcggcgtccccgagtacctggtcacg
gagaccggcccggaccacgagaagaccttcaccgctgccgcccgcgtcggaggcgtctcg
tacggcaccggcaccggccgcagcaagaaggaagcggagcagcaggcggccgagtccgcc
tggcgtgcgatccgctccgcggcggacgagcgcgcgaagcaggaagccgcgacggccgcc
gaggccgaggcccccgacacctcgtcggacacggccccggcctga
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