Streptomyces graminofaciens: SGFS_042400
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Entry
SGFS_042400 CDS
T09325
Name
(GenBank) Serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sgrf
Streptomyces graminofaciens
Pathway
sgrf00260
Glycine, serine and threonine metabolism
sgrf00460
Cyanoamino acid metabolism
sgrf00630
Glyoxylate and dicarboxylate metabolism
sgrf00670
One carbon pool by folate
sgrf00680
Methane metabolism
sgrf01100
Metabolic pathways
sgrf01110
Biosynthesis of secondary metabolites
sgrf01120
Microbial metabolism in diverse environments
sgrf01200
Carbon metabolism
sgrf01230
Biosynthesis of amino acids
sgrf01240
Biosynthesis of cofactors
sgrf04981
Folate transport and metabolism
Module
sgrf_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
sgrf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SGFS_042400
09102 Energy metabolism
00680 Methane metabolism
SGFS_042400
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SGFS_042400
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
SGFS_042400
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SGFS_042400
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
SGFS_042400
Enzymes [BR:
sgrf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
SGFS_042400
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
DUF938
Motif
Other DBs
NCBI-ProteinID:
BBC32946
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Position
complement(4886063..4887301)
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AA seq
412 aa
AA seq
DB search
MSVIPVLETDVLRRQDPELADILLGELDRQSTTLQLVAAENFTSPAVLATLGSALANKYA
EGYPGARHHGGCEIVDVAERLAVERAKALFGADHANVQSHSGSSAVLAAYAALLRPGDTV
LAMGLPFGGHLTHGSPANFSGRWFDFVGYGVDADSGLIDHEQVRALARTHRPKAIVCGSI
SYPRHIDYAFFREVADEVGAYLIADAAHPIGLVAGGAAPSPVPYADIVCATTHKVLRGPR
GGMLLCGSGLAERVDRAVFPFTQGGAQMHTIAAKAVAFGEAATPAFTAYAHQVVANARVL
AEGLAREGLAVVTGGTDTHLLTVDPAPLGVDGRTARGRLTAAGMILDCCALPHGHARGLR
LGTAAMTTQGMGEAEMARVAVLFAQVLRDGGDGRRAREEVRDLAGRFPPYPR
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtcatccctgtcctagagaccgatgtcctgcggcggcaggaccccgagctggcc
gacatcctcctcggtgagctggaccggcagtcgacgacgctccagctcgtcgccgccgag
aacttcacctcgcccgcggtgctggccacgctgggctcggcgctcgccaacaagtacgcg
gagggctatccgggtgcccggcaccacggcggctgcgagatcgtcgacgtcgccgagcgg
ctcgccgtggagcgcgccaaggcccttttcggcgccgaccacgccaacgtccagtcccac
tccgggtcgtcggccgttctggccgcgtacgccgccctgctgcgccccggtgacaccgtc
ctggcgatgggcctgcccttcggcggccacctcacgcacgggtcgcccgccaacttctcc
ggccgctggttcgacttcgtcgggtacggcgtcgacgcggactccgggctcatcgaccac
gaacaggtccgcgccctcgcccgtacgcaccgcccgaaggccatcgtgtgcggttccatc
tcctacccccggcacatcgactacgcgttcttccgcgaggtcgccgacgaggtgggcgcg
tatctgatcgccgacgccgcccacccgatcgggctcgtcgccgggggagcggcgcccagt
ccggtgccgtacgccgacatcgtctgcgccaccacccacaaggtgctgcgcggcccgcgc
ggcggcatgctgctctgcgggagcgggctggccgagcgcgtcgaccgggccgtgttcccg
ttcacccagggcggcgcgcagatgcacaccatcgccgcgaaggccgtcgcgttcggggag
gcggcaacaccggcgttcaccgcgtacgcccatcaggtggtcgccaacgcgcgggtgctg
gcggaggggctggcccgggaagggctcgccgtcgtcaccgggggcaccgacacccacctc
ctcaccgtcgatcccgcgccactcggcgtcgacggacgcacggcacgggggcgcctcacg
gccgccgggatgatcctggactgctgtgccctgccgcacgggcacgcccgcgggctgcgt
ctgggcacggccgcaatgaccacgcagggcatgggcgaggccgagatggcgcgggtcgcc
gtactgttcgcgcaggtcctgcgggacggcggggacggcaggcgggcgcgtgaagaagtg
cgggacctggccggaagatttccgccgtatccgcgctga
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