Streptomyces graminofaciens: SGFS_042530
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Entry
SGFS_042530 CDS
T09325
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
sgrf
Streptomyces graminofaciens
Pathway
sgrf00300
Lysine biosynthesis
sgrf00470
D-Amino acid metabolism
sgrf01100
Metabolic pathways
sgrf01110
Biosynthesis of secondary metabolites
sgrf01120
Microbial metabolism in diverse environments
sgrf01230
Biosynthesis of amino acids
Module
sgrf_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sgrf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SGFS_042530
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SGFS_042530
Enzymes [BR:
sgrf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
SGFS_042530
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Ortholog
Paralog
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
BBC32959
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All DBs
Position
complement(4900924..4902315)
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AA seq
463 aa
AA seq
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MSRSAHPAGPRHADVLPEGHYAAPPADLNTLDPKVWAQTVTRTDDGVVSVGGIDVKTLAE
EFGTPAYFLDEADFRARARAWRTAFGHDADVFYAGKAFLSRAVVRWLHEEGLNLDVCSGV
ELTTALSAGMPADRIAFHGNNKSTVEIHTAIEAGVGRIVLDSFQEIVRVAHIAQSLGKRQ
RVQIRVTVGVEAHTHEFIATAHEDQKFGIPLAGGQAAEAVRRALKLDGLELIGIHSHIGS
QIFDTSGFEVAAHRVVGLLAEVRDEHGVELPEIDLGGGLGIAYTSDDDPREPHEIAKALT
EIVTRECERAKLRTPRISVEPGRAIVGPTAFTLYEVGTIKPLDGLRTYVSVDGGMSDNIR
TALYDAEYSVALVSRASDAEPMLVRVVGKHCESGDIVVKDAFLPADLAPGDLIAVPATGA
YCRSMASNYNHALRPPVVAVNDGEARVVVRRETEEDLLRLDVG
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgagccgatccgcacaccccgccggtccccgccacgccgacgtactgcccgagggccac
tacgccgccccgccggccgacctcaacacgctcgacccgaaggtgtgggcccagaccgtc
acccgtacggacgacggggtcgtcagtgtcggcgggatcgacgtgaagacgctcgccgag
gagttcggcaccccggcctacttcctcgacgaggccgacttccgggcccgggcgcgcgcc
tggcgcaccgccttcgggcacgacgccgacgtcttctacgccggtaaggccttcctttcg
cgggccgtcgtgcgctggctgcacgaggaagggctcaacctcgacgtctgctccggcgtc
gaactcaccaccgccctctccgccggcatgcccgccgaccgcatcgccttccacggcaac
aacaagtccaccgtcgagatccacaccgcgatcgaggccggagtcggccgtatcgtcctc
gactccttccaggagatcgtgcgcgtcgcccacatcgcccagtccctcggcaagcggcag
cgcgtgcagatccgcgtcaccgtgggcgtcgaggcgcacacgcacgagttcatcgccacc
gcgcacgaagaccagaagttcgggattccgcttgccggggggcaggccgccgaggccgta
cggcgggcgctcaagctcgacgggctggagctcatcggcatccactcccacatcgggtcg
cagatcttcgacacctccgggttcgaggtcgccgcgcaccgggtcgtcggacttctcgcg
gaagtccgcgacgagcacggcgtcgagctgcccgagatcgacctcggcggcgggctcggc
atcgcgtacaccagcgacgacgacccccgtgagccgcacgagatcgccaaggcgctcacc
gagatcgtcacgcgcgagtgcgagcgggccaagctgcgcacgccccgcatctccgtcgaa
cccgggcgggccatcgtcggcccgaccgccttcacgctctacgaggtcggcaccatcaag
ccgctcgacggcctgcgcacctacgtctccgtcgacggcggcatgtccgacaacatccgg
accgcgctgtacgacgccgagtacagcgtcgccctcgtctcccgcgcctccgacgccgag
cccatgctcgtgcgcgtggtcggcaagcactgcgagagcggcgacatcgtggtcaaggac
gcgttcctgccggccgacctggcgcccggtgacctgatcgccgtcccggccaccggcgcg
tactgccgttcgatggccagcaactacaaccacgcgctgcgcccgccggtcgtcgccgtc
aacgacggtgaggcccgggtcgtcgtacgcagggagacggaagaggaccttctccgtctc
gatgtcgggtga
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