Streptomyces graminofaciens: SGFS_055670
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Entry
SGFS_055670 CDS
T09325
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sgrf
Streptomyces graminofaciens
Pathway
sgrf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sgrf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SGFS_055670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgrf03019
]
SGFS_055670
03110 Chaperones and folding catalysts [BR:
sgrf03110
]
SGFS_055670
03029 Mitochondrial biogenesis [BR:
sgrf03029
]
SGFS_055670
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sgrf04147
]
SGFS_055670
Enzymes [BR:
sgrf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SGFS_055670
Messenger RNA biogenesis [BR:
sgrf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SGFS_055670
Chaperones and folding catalysts [BR:
sgrf03110
]
Heat shock proteins
HSP60 / Chaperonin
SGFS_055670
Mitochondrial biogenesis [BR:
sgrf03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SGFS_055670
Exosome [BR:
sgrf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SGFS_055670
Exosomal proteins of other body fluids (saliva and urine)
SGFS_055670
Exosomal proteins of breast cancer cells
SGFS_055670
Exosomal proteins of colorectal cancer cells
SGFS_055670
Exosomal proteins of bladder cancer cells
SGFS_055670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
CbiA
Motif
Other DBs
NCBI-ProteinID:
BBC34273
LinkDB
All DBs
Position
complement(6327581..6329203)
Genome browser
AA seq
540 aa
AA seq
DB search
MAKIIAFDEEARRGLERGMNQLADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIE
LEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPMALKRGIE
KAVEAVSGALLDQAKEVETKEQIASTASISAADTQIGELIAEAMDKVGKEGVITVEESQT
FGLELELTEGMRFDKGYISAYFATDMERMEAVLEDPYILIANSKITNVKDLLPLLEKVMQ
SGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLNDIAILTGGEVIS
EEVGLKLENTSIDLLGRARKVVITKDETTVVDGAGSSEQVQGRVNQIRAEIENSDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALIQA
SSVFEKLDLEGDEATGANAVRLALEAPLKQIAVNGGLEGGVVVEKVRNLQVGHGLNAATG
EYVDMIASGIIDPAKVTRSALQNAASIAALFLTTEAVIADKPEKASAPAGGGMPGGDMDF
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggccaagatcatcgcgttcgacgaggaggcgcggcgcggcctcgagcgcggcatgaac
cagctcgcggacgccgtcaaggtgacgctcggccccaagggtcgcaacgtcgtcctcgag
aagaagtggggcgcccccacgatcaccaacgatggtgtgtccatcgccaaggagatcgag
ctcgaggacccgtacgagaagatcggcgccgagctggtcaaggaagtcgccaagaagacg
gacgacgtcgccggtgacggtacgaccaccgcgaccgttctcgcccaggcgctcgtacgc
gagggcctgcgcaacgtcgccgcgggtgccaacccgatggccctgaagcgcggtatcgag
aaggccgtcgaggccgtctccggtgcgctgctcgaccaggccaaggaggtcgagaccaag
gagcagatcgcctccacggcctccatctccgccgccgacacccagatcggcgagctgatc
gccgaggcgatggacaaggtcggcaaggaaggcgtcatcacggtcgaggagtcgcagacc
ttcggtctggagctcgagctcaccgagggcatgcgcttcgacaagggctacatctcggcg
tacttcgcgaccgacatggagcgcatggaggcggtgctcgaggacccctacatcctcatc
gccaactccaagatcacgaacgtcaaggacctgctcccgctcctggagaaggtcatgcag
tcgggcaagccgctgctgatcatcgccgaggacgtcgagggcgaggccctgtcgaccctg
gtcgtcaacaagatccgcggcaccttcaagtccgtcgcggtcaaggccccgggcttcggt
gaccgccgcaaggcgatgctgaacgacatcgccatcctcaccggcggcgaggtcatctcc
gaggaggtcggtctcaagctcgagaacacctccatcgacctcctgggccgtgcccgcaag
gtcgtcatcaccaaggacgagacgaccgtcgtcgacggcgccggctcctccgagcaggtc
cagggccgggtcaaccagatccgcgccgagatcgagaacagcgactcggactacgaccgc
gagaagctgcaggagcgcctggcgaagctcgccggcggtgtcgcggtcatcaaggccggt
gccgccaccgaggtggagctcaaggagcgcaagcaccgcatcgaggacgccgtccgcaac
gcgaaggcggccgtcgaggagggcatcgtcgccggtggtggcgtggccctcatccaggcc
tcctcggtcttcgagaagctggacctggagggtgacgaggcgaccggcgccaacgccgtg
cggctcgccctggaggccccgctcaagcagatcgccgtcaacggcggtctcgagggtggc
gtcgtcgtggagaaggtccgcaacctccaggtcggccacggcctgaacgccgcgaccggt
gagtacgtcgacatgatcgcctccggcatcatcgacccggcgaaggtcacgcgctccgct
ctgcagaacgccgcctccatcgccgcgctgttcctcaccaccgaggccgtcatcgccgac
aagccggagaaggcgtccgcgcccgccggtggcggcatgccgggcggtgacatggacttc
tga
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