Streptomyces graminofaciens: SGFS_057930
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Entry
SGFS_057930 CDS
T09325
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
sgrf
Streptomyces graminofaciens
Pathway
sgrf03030
DNA replication
sgrf03430
Mismatch repair
sgrf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sgrf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SGFS_057930
03430 Mismatch repair
SGFS_057930
03440 Homologous recombination
SGFS_057930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgrf03032
]
SGFS_057930
03400 DNA repair and recombination proteins [BR:
sgrf03400
]
SGFS_057930
Enzymes [BR:
sgrf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SGFS_057930
DNA replication proteins [BR:
sgrf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SGFS_057930
DNA repair and recombination proteins [BR:
sgrf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SGFS_057930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
RuvB_N
AAA_22
Rad17
AAA_14
AAA_30
zf-CXXC
AAA_5
AAA_18
nSTAND3
AAA_19
Mg_chelatase
AAA_16
AAA_28
TsaE
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
BBC34499
LinkDB
All DBs
Position
complement(6563341..6565884)
Genome browser
AA seq
847 aa
AA seq
DB search
MGAYNLVCVSSLALYRRYRPESFAEVIGQEHVTDPLQQALRNNRVNHAYLFSGPRGCGKT
TSARILARCLNCEQGPTPTPCGECQSCQDLARNGPGSIDVIEIDAASHGGVDDARELREK
AFFGPAGSRYKIYIIDEAHMVTSAGFNALLKVVEEPPEHLKFIFATTEPEKVIGTIRSRT
HHYPFRLVPPGTLREYLGEVCGKEKIPVEEGVLPLVVRAGAGSVRDSMSVMDQLLAGATD
AGVTYAMATSLLGYTDGSLLDSVVESFASGDGAAAFEVVDRVIEGGNDPRRFVADLLERL
RDLVILAAVPDAVEKGLIDAPVEVLERMQAQAGVFGAAELSRAADLVNEGLTEMRGANSP
RLQLELICARVLLPATYGDERSVMARLDRLERGVNFSHGGPGPAMGYVPAPDVHGAMAGG
MAGGVPGGGAQAAGMVPPGGGAAAARAAVRGGGAPGGGAGVPQSVPGAAGAPGVPGVPGT
AAAPGADAYGAGQARPPAAPAPAPAPAPGHAPVSGPVSPPVAGAPAEAQQAGPAVPAASV
PPANAPAPAPGPGAPAAPAPTSAAPGAWPTPAAAGSGRRPGGWPTATPAGGGAPGGGQAP
AAPAAAAAAPAGPGPAAAAPAPSGFAPVAGGLDPRVLWPNVLEAVKNRRRFTWILLSQNA
HVAGFDGTTLQIGFVNAGARDNFASSGSEDVLRAALTEQFSVNWKIEAVIDTSGGGAGAP
GGYGGAAPATGGYGSGYGAGGGSGYGGGGAGGYGGGSSAPAGRPAAPPSAPAPGPASPGQ
APHQHSASTAPPISAPTPPPAPEPPPVSPEDDTPEDDDPDLDESALSGHELIVRELGATV
VEEIANE
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
gtgggcgcctataacctcgtatgtgtgtcgtctctcgcgctgtaccgccgctatcgcccg
gagtcattcgccgaggtcatcgggcaggagcatgtcaccgacccgctgcagcaggcgctg
cggaacaaccgggtcaatcacgcgtacctgttcagcgggccgcgcggctgcggcaagacg
acgagtgcgcgcattctggcgcggtgtctgaactgcgagcaggggcccacgccgacgccg
tgcggtgagtgccagtcgtgccaggacctggcgcggaacggcccggggtcgatcgacgtc
atcgagatcgacgccgcgtctcacggtggtgtcgacgacgcccgtgagctgcgcgagaag
gcgttcttcgggcccgccggcagtcggtacaagatctacatcatcgacgaggcccacatg
gtcacgtcggccggtttcaacgcgctgctgaaggtcgtcgaggagccgccggagcacctc
aagttcatcttcgcgaccaccgagcccgagaaggtcatcgggacgatccggtcgcgtacg
caccactatccgttccggctcgtgccgcccgggacgcttcgtgaatacctcggcgaggtc
tgcgggaaagagaagatcccggtcgaggagggtgtgctgccgctggtcgtgcgggcgggc
gccggttccgtgcgtgactcgatgtccgtcatggaccagctgctggcgggcgcgaccgac
gcgggtgtgacgtatgccatggccacgtccctgctggggtacacggacgggtcgctgctc
gactccgtcgtcgagtccttcgcttcgggggacggggcggcggccttcgaggtcgtggac
cgggtgatcgagggcgggaacgacccacgcaggttcgtcgccgatctgctggagcggctt
cgggatctggtgatcctggccgccgtgcccgatgccgtcgagaaggggctcatcgacgcg
cccgtcgaggtcctcgaacgcatgcaggcccaggccggggtcttcggcgcggccgaactc
agccgggccgccgatctcgtcaacgaagggctgacggagatgcggggcgcgaactcgccc
cgactccagctcgaactcatctgcgcacgcgtgcttctccccgcgacatacggcgacgag
cgctccgtcatggcccgcctcgaccgactggagcggggcgtcaacttctcccatggcggc
cccgggcccgccatgggctacgtgcccgcgcctgatgtgcatggcgccatggccggcgga
atggccggtggggtgcctggtggcggggctcaggcggcgggcatggtgccgccggggggc
ggtgccgccgcggctcgggctgctgtgcgagggggcggggcgccgggcgggggcgcgggt
gttccgcagagtgtgccgggtgcggcgggcgcacctggtgttcctggtgttcccggtacg
gcggctgctccgggtgcggatgcgtacggcgctgggcaggcgaggccgcctgcggctcct
gcgcccgcacctgcgcccgcgcccgggcacgcacctgtgtccgggcctgtttcgcccccg
gttgcgggcgctccggcggaggctcagcaggctgggcccgccgtgcctgccgcttcagtc
ccgccggcgaacgcaccggcacccgcgcccgggccgggagcccctgccgctcccgctccc
acttccgccgcccccggcgcctggcccacacccgcagccgcgggcagtgggcggcgtccc
ggcgggtggccgacggccacgcctgccggtggtggggccccgggcggaggccaggcaccg
gcggcaccggctgccgccgcggccgccccggcggggcccggccccgccgccgctgccccg
gctccctccggcttcgctcccgtcgccggtggcctcgacccgcgcgtgctgtggccgaac
gtcctggaggcggtcaagaaccgccgccgcttcacctggatcctgctcagccagaacgcg
cacgtcgccggtttcgacggcacgacacttcagatcggcttcgtgaacgcgggcgcccgg
gacaacttcgcgagcagtggcagcgaggacgtcctgcgggcggcgctgaccgagcagttc
agcgtgaactggaagatcgaggccgtcatcgacacctccggcggcggcgcgggtgctccc
ggcggttacgggggtgccgctcccgccaccggtggctacggcagcggttacggcgcaggc
ggcggcagcggttacggcggaggcggtgccggtggctacggtggcgggtcgtccgccccg
gccgggcgccctgccgcgcccccctccgctccggcgcccggcccggcgtccccgggacaa
gccccgcaccagcactcggcctcgacggccccgcccatttccgcgcccaccccgcctccg
gccccggagccgccccccgtctcccccgaggacgacacccccgaggacgacgaccccgac
ctcgacgagtccgcactctccggccacgaactgatcgtgcgggaactgggcgcgacggtg
gtggaggagatcgccaacgagtag
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