Streptomyces graminofaciens: SGFS_058250
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Entry
SGFS_058250 CDS
T09325
Name
(GenBank) RNA polymerase sigma-F factor
KO
K03090
RNA polymerase sigma-B factor
Organism
sgrf
Streptomyces graminofaciens
Brite
KEGG Orthology (KO) [BR:
sgrf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgrf03021
]
SGFS_058250
Transcription machinery [BR:
sgrf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SGFS_058250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
GerE
MarR_2
HTH_3
MarR
NirdL-like_HTH
DUF134
DUF7343
HTH_24
HTH_Tnp_4
Motif
Other DBs
NCBI-ProteinID:
BBC34531
UniProt:
A0ABN5VR25
LinkDB
All DBs
Position
6598473..6599183
Genome browser
AA seq
236 aa
AA seq
DB search
MLQPGSPEHNRVRGALIEANLPLVRYAAARFRSRNEPMEDVVQVGTIGLINAIDRFDPDR
GVQFPTFAMPTVIGEIKRYFRDNVRTVHVPRRLHELWVQVNTATEDLTTAFGRAPSTAEI
AERLRIGEDEVLSCIEAGRSYHATSLEAAQEGDGLPGLLDRLGYEDPELDGVEHRDLVRH
LLVQLPEREQRILLLRYYSNLTQSQISAELGVSQMHVSRLLARSFARLRSANRIEA
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
gtgctgcagccgggctcccccgagcacaaccgcgtacgtggagcgctcatcgaggcgaac
ctcccgctcgtgcgctacgcggccgcccgcttccgctcccgcaacgagcccatggaggac
gtggtccaggtcgggaccatcgggctgatcaacgccatcgaccgcttcgaccccgaccgg
ggcgtgcagttcccgaccttcgcgatgccgaccgtcatcggcgagatcaagcgctacttc
cgcgacaacgtccgtacggtccatgtcccgcgccgactgcacgagctgtgggtgcaggtg
aacaccgcgaccgaggacctcaccaccgcgttcgggcgcgcaccctccaccgccgagatc
gccgagcggctgcgcatcggcgaggacgaggtcctctcctgcatcgaggccggacgctcg
taccacgcgacctcgctggaggccgcccaggagggcgacggactgccggggctgctcgac
cggctcggctacgaggaccccgagctcgacggcgtcgaacaccgcgacctcgtgcggcac
ctcctcgtccagcttcccgaacgcgagcagcgcatccttctgctgcgctactacagcaat
ctgacgcagtcccagatcagcgccgagctcggcgtctcccagatgcacgtctcccggctg
ctcgcccgcagcttcgcccggctgcgctcggccaaccgcatcgaggcgtag
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