Streptomyces graminofaciens: SGFS_058630
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Entry
SGFS_058630 CDS
T09325
Name
(GenBank) hypothetical protein
Organism
sgrf
Streptomyces graminofaciens
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS
PAS_9
PAS_4
PAS_8
Response_reg
PAS_7
HisKA
PAS_10
Apolipoprotein
Motif
Other DBs
NCBI-ProteinID:
BBC34569
LinkDB
All DBs
Position
6637782..6642944
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AA seq
1720 aa
AA seq
DB search
MSSRPSRGAARLAAILDALPDALVLVNANGTVVNANTIALEAFEAPGTALVGRGLLDLLP
EFDSRLIPGSMRRPDTMDPTGRTKPTRMIARRTDGSEFPVEVTSANLENGQQAYDGYGSA
NDELLMLVVRDLSGTIDTEAELARSQRQTEMILRAAAEGVVGTDTDGRIVLVNPAAAQIL
GYRASDLGGRELHTLVLHSRDDGSPFPYAESPLADTLRSGRKHRVRGQVLWSKGGDKVSV
DLTTAPVRDGDQLVGAVMTFTDRRPYDKLAEEKDAEAEAYAEAMERLVKEHAEQLEKARE
EHTAELSELAEQHAEELAAGDERYAALGEREKDRYEALAARHEQLLAVLGTSLRGPLDQL
RSELGTLAADDAGQLWPEANQVLHHLTAGYSRITTLIDNVLGYQRIDAGEEGLVRTAVML
DAVVAAGVDGAVELIGPGRIQFAVHAPPIEAEVDQTRLATALAHLIADVAGVDATGNSPM
SAGGYMDNTVVVAAAQRGEVVRIEVRGPYAGGDPVHQPIVQGIVRAHGGVLQTHEVPGMS
GSAYVLEVPLGGGAGAVPAAQIEVAQSGGGSDAATGAEGAGGAEVALPEQASGGRRRARR
SSVDAFLESEDGPGPEAEAAPAPTGRRRRRAEESGAVDAPVPVQAGGGEGDGGTGRRRGL
PATGDDGSGEAVAEGAVVTAAEHAAGAAANATGLGGTVPPQGVPVPPPGGRRARRPESEQ
HIPNALPPALPAAPASGADGSAAASASSGDTDSSQPTGRRRRALANAEERAAAPAQGPRP
VFALPPAEADRGPDYAEAGGTGLGPVPVPAAMPAPAPLPAAVPGPVPVSGPVPVSGPVPV
PGPVPVPGPVPVSGPVPVPGPVPVPGPVPVPGPAPVPGPVPAAMPAPAPAALPAQQDSYD
DDGGQGAVAAAVPGAQAVAGGPGAGQVPVVPGAGQAPVVPGAPDGGVDDGRHDAALHDPS
ADHTPPQPHPVPTPTGRRRAARPAPAPQQGDSTATATATVAPAQGVPPQGGPAQAVAQQG
VPTQGVQAQGVQTQGVPAQGVPGQGIAGQSVAAGAQPVPAQGVQGAVQQPVPAHGVPAAV
AAAQPVVGQAVPGQPVPAQGVPGQPVPAQGVPGQPVPAQGVPGTPQPVPPQPVPAQPVPA
QPVPAQAAAPVANARPVPAAGVPAQATSPGSAQPAPQPAPQPPLQAQPQPQPWPDAQDSS
GAGIPVAAAPAAVPAEQPAQAGQAPQPTPASGTPLPPEQTVQQPRAAQPLPAETAPPVAP
AAPAATAQPVAAAQPVAAPLDPNSTHGRAISVRTLGQGVPFARQAAPQAQVQAQAQSTAT
PAPHQPGGSGRRRKLGTPPEPTAERPETAARPHPQPGQVHATGQIPLPAQAQPQVAQPSL
AGQGPLTPQAAQAAQAAQAAQPAQTTPQVAQPSLAGQVPLPPQPSLAGQSRLVGGTDGAG
RSYAIGAPDENAAEGPEPLDGPGGAVEIPDRPQPQPMDDELPPEPLDNPRRLLVWPAPDM
TTHQALSERGYRPVIVNSREDVDAQVSAYPAALFVDPLTGPITRTALQSLRQAAVAAEVP
VLVTAGLGQATREAAYGADPAILLKALAPRDSEQHPPRVLLIEEHAEIALALTSTLERRG
MQVARAASDPDAVTLASQMRPNLVVMDLMQVHRHQAGIIDWLRANGQLTRTPLVVYTAAV
DQTELPRLASGETVLFLAERSTSPDVQTRIVDLLARIGTN
NT seq
5163 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagcaggccatcccgaggcgctgctcgcctcgcagccatactggacgcgctcccc
gacgcgttggtgctggtcaacgccaatgggaccgtcgtcaacgccaacacgatcgcgctc
gaggccttcgaggcgccgggcaccgccctggtcgggcgcgggttgctcgatctgctgccc
gagttcgactcacggctcatcccgggctcgatgcgacggcccgacaccatggacccgacc
gggcggacgaagccgacccgcatgatcgcgcgccgtaccgacggcagtgagttcccggtc
gaggtcacgagcgcgaatctggagaacgggcagcaggcgtacgacggttacggctccgcc
aatgacgagctgctcatgctggtcgtacgcgatctgtcgggcaccatcgacaccgaggcc
gaactcgcgcgttcgcaacggcagaccgagatgatccttcgggccgccgccgagggagtg
gtggggaccgacaccgacgggcggatcgttctcgtcaatccggccgccgctcagatactg
ggctatcgggccagtgatctcggcggacgggagctgcacaccctcgttctgcactcgcgt
gacgacggctctcccttcccgtacgccgagtcgccgctggcggacaccctgcggtccggg
cgcaagcaccgggtgcgcgggcaggtgctgtggtcgaagggcggcgacaaggtctcggtc
gatctgacgaccgcgcccgtgcgcgacggggaccagctcgtcggcgccgtgatgacgttc
acggaccggcggccgtacgacaagctcgccgaggagaaggacgccgaggccgaggcgtac
gccgaggcgatggagcggctcgtcaaggagcacgccgagcaactggagaaggcgcgtgag
gagcacaccgccgaactgagcgagctggccgagcagcacgccgaggaactcgccgccggg
gacgagcggtacgcggcgctcggggagcgggagaaggaccggtacgaggcgctggcggcg
cggcacgagcagctgctcgccgtgctgggcacctccctgcgcggcccgctggaccagctc
cgcagcgagctgggcaccctcgccgccgacgacgccgggcagctgtggcccgaggccaac
caggtgctccaccacctcaccgccgggtactcgcgcatcacgacgctgatcgacaacgtg
ctgggttaccagcggatcgacgccggtgaggagggcctcgtccgtacggccgtcatgctc
gacgcggtcgtcgcggccggtgtcgacggggccgtggagctgatcgggccggggcggatc
cagttcgccgtgcacgccccgcccatcgaggccgaggtggaccagacccggctcgcgacc
gcgctcgcgcatctcatcgcggatgtcgcgggggtcgacgcgacgggcaactcccccatg
tccgccggtggctacatggacaacaccgtcgtcgtggcggccgcgcagcgcggtgaggtc
gtgcggatcgaggtgcgcgggccgtacgccgggggagacccggtgcatcagccgatcgtc
caggggatcgtgcgggcgcacggcggtgtgctccagacccatgaagtgcccgggatgagc
ggcagcgcgtatgtgctggaggtgccgctcggcggtggcgccggggcggtgcccgcggcc
cagatcgaggttgcccagagtggcgggggttcggatgcggccaccggtgcggagggcgct
ggcggggccgaggtcgcgctgcccgagcaggcctccggtgggcggcggcgggcccggcgg
tcgtcggtggacgcgttcctggagagcgaggacggccccggtcccgaggcggaggccgcg
cccgcgcccaccgggcggcgcaggcggcgggccgaggagtcgggcgccgttgacgcgccg
gttccggtgcaggccgggggtggcgagggcgacggaggcactgggcggcggcgtgggctg
ccggccacgggcgacgacggttccggcgaggcggtggccgagggcgcggtggtcacggcg
gccgagcatgccgcgggggccgccgccaacgccaccgggctgggcgggacggtaccgccg
cagggcgtgcccgtgcctccgccgggcggacgacgcgcccgccgtccggagtccgaacag
cacatcccgaacgccctgccgccggcgctccccgcggctccggcgagcggtgcggacggt
tccgccgcagcttccgcttcctccggcgacaccgattcctctcagccgaccgggcgacgt
cgccgtgcgctggccaacgcggaggagcgcgccgccgcgcccgcgcagggccctcgcccc
gtgttcgcactgccgccggccgaggcggaccggggtcccgactacgccgaggccggcggc
accgggctcggacccgtgccggtgcctgccgccatgcccgcgcccgctcctctgccggct
gctgttcccggtccggttccggtttccggtccggttccggtttccggtccggttccggtt
cccggtccggttccggttcccggtccggttccggtttccggtccggttccggttcccggt
ccggttccggttcccggtccggttccggttcccggtccggctcctgttcccggtccggtt
ccggccgccatgcctgctcccgcgcccgcggccctgcccgcgcagcaggattcgtacgac
gatgacggcggccagggtgcggtcgcggccgcagtgccgggcgcccaggccgtcgccggc
gggcccggtgcgggtcaagtgccggtggtgccgggtgcgggtcaggcaccggtggtgccg
ggtgcgccggacggtggcgtggacgacggtcgccatgacgccgcgctgcacgacccgtcc
gccgaccacaccccgccgcagcctcacccggtgcctacgcccacgggccgccgccgggcc
gcgcgccccgcgccggctccgcagcagggggactccaccgcgaccgctaccgccactgtg
gcgcccgcgcagggcgttccgccgcagggtggcccggcccaggccgtggctcagcagggt
gttcctactcagggggtacaggctcagggggtacagactcagggggtaccggctcagggc
gttccgggccagggcattgcgggccagagcgttgcggcgggtgcccagccggttcccgcg
caaggtgttcagggggccgtacagcagcctgtgcccgcgcatggcgtcccggcggcggtc
gctgccgcgcagcccgtcgtcggtcaggccgtccccgggcagcccgttccagcacaaggc
gtccccggacaacccgttccggcacaaggcgtccccgggcagcccgtgcccgcgcagggc
gttccgggcacccctcagccggtaccaccccagccggtgcccgcccaacccgtgcccgcc
caacccgtgcccgcccaggctgccgcccccgtcgccaacgcccgcccggtccccgcggcc
ggtgtccccgcgcaggccacgtctcccggctcggcacagcctgcccctcagcccgctcct
cagcccccgcttcaggcccaaccccagccgcagccctggccggacgcgcaggacagctct
ggcgcgggcatcccggtagcggccgcacccgccgccgtaccggccgagcagcccgcacag
gcggggcaggctccacagccgacgcccgcttcgggcaccccgttgccgccggagcagacc
gtgcagcaaccgcgtgccgcgcagccgctgcccgccgagacggcccctccggtcgcccct
gccgcgcctgccgccaccgcccagcccgtcgcggcggcccagcccgtcgccgcacccctc
gaccccaactcgacccacggtcgggcgatcagcgtgcggaccctcggccagggcgtaccg
ttcgcccgtcaggccgccccccaggcacaggtccaggcgcaggcacagtccaccgccacc
cccgcgcctcaccagcccggcggttccggtcggcgccgcaagctcgggacgcctcccgag
cccaccgccgagcgcccggagacggcggcccgcccgcacccgcagcccgggcaggtccac
gccaccggccagatcccgctcccggcccaggcacagccgcaggtcgcccagccatccctg
gccgggcagggcccgctcacaccgcaggcagcacaggcagcacaggcggcacaggcagcg
caaccggcgcagaccaccccccaggtagcccagccctccctcgccggacaggtccccctc
ccgccgcagccgtccctcgccgggcagtcgcggctggtgggtggtaccgacggggccggg
cggtcgtacgccataggggccccggacgagaacgccgccgaggggcccgagccgctcgac
gggcccggtggcgccgtggagatccccgaccggccccagccacagccgatggacgacgag
ttgccgccggagccgctggacaacccacgtcggctgctggtgtggcccgcgccggacatg
acgacccaccaggcgctgagcgagcgcggctaccggccggtcatcgtgaactcccgcgag
gacgtcgacgcccaggtctccgcatacccggccgcgctcttcgtcgacccgctcaccggc
ccgatcacgcggacggccctgcagtcgctgcggcaggccgccgtggccgccgaggtgccc
gtcctcgtcacggccggactcggccaggcgacgcgcgaggcggcgtacggtgccgacccg
gccatcctgctgaaggcgctcgcgccgcgggactccgagcagcacccgccgcgcgtcctg
ctgatcgaggagcacgcggagatcgcactcgcgcttacctcgacgctggagcggcgcggg
atgcaggtcgcgcgagccgcgtccgacccggacgccgtcacgctcgcctctcagatgcgg
cccaacctcgtggtgatggacctgatgcaggtgcaccgccaccaggccgggatcatcgac
tggctgcgtgcgaacggccagttgacccgcacaccgctcgtcgtctacaccgccgccgtc
gatcagaccgaactcccgcgcctggcctcgggcgagacggtcctgttcctcgcggaacgt
tcgacgagcccggacgtgcagacccggatcgtggacctgctggcccgcatcggcacgaac
tga
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