Streptomyces graminofaciens: SGFS_070210
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Entry
SGFS_070210 CDS
T09325
Name
(GenBank) AMP-binding enzyme
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sgrf
Streptomyces graminofaciens
Pathway
sgrf00061
Fatty acid biosynthesis
sgrf00071
Fatty acid degradation
sgrf01100
Metabolic pathways
sgrf01212
Fatty acid metabolism
sgrf02024
Quorum sensing
sgrf04146
Peroxisome
Module
sgrf_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sgrf00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SGFS_070210
00071 Fatty acid degradation
SGFS_070210
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SGFS_070210
09145 Cellular community - prokaryotes
02024 Quorum sensing
SGFS_070210
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sgrf01004
]
SGFS_070210
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sgrf04147
]
SGFS_070210
Enzymes [BR:
sgrf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SGFS_070210
Lipid biosynthesis proteins [BR:
sgrf01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SGFS_070210
Exosome [BR:
sgrf04147
]
Exosomal proteins
Exosomal proteins of breast milk
SGFS_070210
Exosomal proteins of breast cancer cells
SGFS_070210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
BBC35727
LinkDB
All DBs
Position
7822068..7823978
Genome browser
AA seq
636 aa
AA seq
DB search
MSSLDRTEPVLVDPELKRLDGVVREAYVPPLATPVTYGSLAEIPFDNAAQEPDAVVLSRK
YADEGEGDGRWRDVTAAGFAAEVLAVAKGLIAEGLMPGDRLAIMARTTYEWTLLDFAAWA
AGLVTVPVYPTSSVFQTRWILQDSGAVALAVESTSQAAALGPERDRIPDLRHMWVFEKGH
VERLAERGRDVPDQEVAVRRGVLGPDTLATLIYTSGTTGRPKGCALTHGNFFAEVDNAID
LLYPIFRARTDEEASTLLFLPLAHVFGRMVAIGCMRARVRLGHSPSFRTEDLLADLKSFR
PTFLLVIPYVLEKVFNTARASAERMGRASSFDRAATVARRYGEALEADQHGTGPGPSGFL
KAARTFYDPLVYRRIRNALGGRVRYLICGGSPLGRRLAAFYAGAGIEVFEGYGMTETTAA
VTVTPPIRPRLGTVGWPLPGTRVRIATDGEVLLHGGQIFRGYWDPHGGGVVPAGPDGWFA
TGDIGELDEDGYLTITGRKKEILVTASGKNVAPAPLENWLRSHPLIAHAMVIGDRRPYVT
ALLTLDPEGITHWRQMNGKHGVPPELIADDPELLTVLQRAVDEANRLVSRPESIRRFTVV
PGGFTEEAGHLTPSMKLRREVVEEAFAEEIEGLYGS
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
gtgtccagcctcgaccgcaccgaacccgtgctcgtggaccccgagctgaagcggctggac
ggcgtcgtgcgggaggcatacgtaccgccgctcgccacgcccgtcacctacggctcgctc
gccgagatcccgttcgacaacgcggcccaggaaccggacgccgtggtcctcagccgcaag
tacgcggacgagggcgaaggggacggccgttggcgggacgtgacggcggccggcttcgcc
gccgaggtgctcgcggtggcgaagggcctgatcgcggagggcctgatgccgggcgaccgt
ctcgcgatcatggcgcgcacgacgtacgagtggacgctcctggacttcgcggcgtgggcg
gcgggcctggtgacggtccccgtctaccccacctcgtccgtcttccagacccgctggatc
ctccaggactcgggcgcggtcgcgctggcggtggagtcgacgagccaggcggcggccctc
ggccccgaacgcgatcgcatccccgacctgcgccacatgtgggtcttcgagaagggccac
gtggaacgcctcgcggagcgcggccgtgacgtgccggaccaggaagtggccgtacggcgt
ggggtgctgggccccgacacgctggcgaccctcatctacacctcgggcacgacgggccgc
ccgaagggctgcgcgctgacccacggcaacttcttcgcggaggtcgacaacgcgatcgac
ctcctgtacccgatcttccgggccaggacggacgaggaggcgtcgaccctcctcttcctc
cccctcgcccatgtcttcggccgcatggtggcgatcggctgtatgcgggcgagggtccgc
ctgggccactcgccgagcttccgcaccgaggacctgctggcggacctgaagtccttccgc
ccgaccttcctcctggtcatcccctatgtcctggagaaggtcttcaacacggcccgggcc
tccgccgaacgcatgggccgcgcctcgtccttcgaccgcgcggcgacggtcgcccgccgc
tacggcgaggcgctggaggccgaccagcacggcacgggacccggcccgtccggcttcctg
aaggcggcccgcaccttctacgaccccctcgtctaccggcgcatccgcaatgcgctgggc
ggccgggtccgttacctgatctgcggcggctcacccctgggccgcagactcgcggccttc
tacgcgggcgccggcatcgaggtcttcgagggctacggcatgacggagacgacggcggcc
gtgacggtcaccccaccgatccgcccccgcctgggcacggtcggctggccgctccccggc
acgcgggtccgcatagcgacggacggcgaggtgctgctgcacggcggccagatcttccgg
ggctactgggatccgcacgggggcggggtggtcccggcgggccccgacggctggttcgcg
acgggcgacataggcgagctggacgaggacggctacctgaccatcaccggccgtaagaag
gagatcctggtcacggcgagcggcaagaacgtggccccggctcccctggagaactggctc
cgctcccaccccctgatcgcccacgcgatggtcatcggcgaccgccgcccctatgtcacc
gccctgctgaccctggaccccgaaggcatcacgcactggcgccagatgaacggcaaacac
ggggtgccaccggaactcatcgcggacgacccggagctcctgacggtcctccagcgagcc
gtggacgaggcgaaccgcctggtctcccgcccggagtccatccgccgcttcacggtggtg
cccgggggcttcacggaggaggcgggccacctgacgccctcgatgaaactgcgcagggag
gtggtggaggaggcgttcgccgaggagatcgaagggttgtacgggagctag
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