Streptomyces graminofaciens: SGFS_072360
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Entry
SGFS_072360 CDS
T09325
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
sgrf
Streptomyces graminofaciens
Brite
KEGG Orthology (KO) [BR:
sgrf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sgrf03016
]
SGFS_072360
Enzymes [BR:
sgrf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
SGFS_072360
Transfer RNA biogenesis [BR:
sgrf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SGFS_072360
Prokaryotic type
SGFS_072360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
BBC35942
LinkDB
All DBs
Position
8043342..8044208
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AA seq
288 aa
AA seq
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MSDEVQPGFVRVRLDLSYDGSEFSGWAKQAGGRRTVQGEIEDALRTVTRAGGTTYELTVA
GRTDAGVHARGQVAHVDLPESVWREHHEKLLKRLAGRLSRDVRVWALREAPSGFNARFSA
VWRRYAYRVTDNPGGVDPLLRNHVLWHDWPLDVDAMNEAARRLLGEHDFAAYCKRREGAT
TIRTLQELSLVRGEDGIITATVRADAFCHNMVRSLIGALLFVGDGHRDADWPGKVLGAGV
RDSAVHVVRPHGLTLEEVGYPADELLAARNKEARNKRTLPGAPGAGCC
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgacgaagtacagcccgggttcgtgcgggtacggctggatctttcctacgacggt
tccgagttctccgggtgggccaagcaggccggggggcggcggaccgtgcagggggagatc
gaggacgcgctgcggaccgtgacgcgggccgggggcaccacctacgagctgaccgtggcc
gggcggacggatgccggggtgcacgcgcgggggcaggtggcccatgtggatctgccggag
agcgtctggcgtgagcatcacgagaagctgctgaagcggctcgccgggcggctgtccagg
gacgtccgggtgtgggccctgcgggaggcccccagcggcttcaacgcgcggttctcggcc
gtgtggcggcggtacgcctatcgggtcaccgacaacccgggcggggtcgatccgctgctg
cgtaaccacgtcctctggcacgactggccgctggacgtggacgccatgaacgaggccgcg
cggcggctgctcggcgagcacgacttcgccgcctactgcaagcggcgcgagggggcgacg
accattcgtacgctccaggagctgagcctggtgcggggcgaggacgggatcatcaccgcc
accgtgcgcgccgacgcgttctgccacaacatggtgcgctcgctcatcggggcgctgctg
ttcgtgggggacgggcaccgggacgccgactggcccgggaaggtgctgggcgccggagtg
cgggactccgccgtgcatgtcgtacggccgcacgggctgaccctggaagaggtcgggtat
ccggcggacgagctgctggccgcgcggaacaaggaggcgcggaacaagcggacgctgccg
ggcgcgcccggggccggctgctgctga
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