KEGG   Streptomyces graminofaciens: SGFS_072760
Entry
SGFS_072760       CDS       T09325                                 
Name
(GenBank) 60 kDa chaperonin
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
sgrf  Streptomyces graminofaciens
Pathway
sgrf03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sgrf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SGFS_072760
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sgrf03019]
    SGFS_072760
   03110 Chaperones and folding catalysts [BR:sgrf03110]
    SGFS_072760
   03029 Mitochondrial biogenesis [BR:sgrf03029]
    SGFS_072760
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sgrf04147]
    SGFS_072760
Enzymes [BR:sgrf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     SGFS_072760
Messenger RNA biogenesis [BR:sgrf03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     SGFS_072760
Chaperones and folding catalysts [BR:sgrf03110]
 Heat shock proteins
  HSP60 / Chaperonin
   SGFS_072760
Mitochondrial biogenesis [BR:sgrf03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    SGFS_072760
Exosome [BR:sgrf04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   SGFS_072760
  Exosomal proteins of other body fluids (saliva and urine)
   SGFS_072760
  Exosomal proteins of breast cancer cells
   SGFS_072760
  Exosomal proteins of colorectal cancer cells
   SGFS_072760
  Exosomal proteins of bladder cancer cells
   SGFS_072760
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-ProteinID: BBC35982
UniProt: A0ABM7FHS4
LinkDB
Position
8081441..8083063
AA seq 540 aa
MAKILKFDEDARRALERGVNKLADTVKVTIGPKGRNVVIDKKFGAPTITNDGVTIAREVE
VEDPFENLGAQLVKEVATKTNDIAGDGTTTATVLAQALVREGLKNVAAGASPAALKKGID
AAVKAVSEELLATARPIEEKSDIAAVAGLSAQDSQVGELIAEAMDKVGKDGVITVEESNT
FGLELDFTEGMAFDKGYLSPYFVTDQERMEAVLDDPYILIHQGKIGAIADLLPLLEKVIQ
SNASRPLLIIAEDVEGEALSTLVVNKIRGTFNAVAVKAPGFGDRRKAMLQDMATLTGAEV
ISEEVGLKLDQVGLDVLGSARRVTVTKDDTTIVDGAGNSEAVQGRVAQIKSEIENTDSDW
DREKLQERLAKLAGGVCVIKVGAATEVELKEKKHRLEDAISATRAAVEEGIVSGGGSALV
HAVKVLEDNLGKTGDEATGVAVVRKAAVEPLRWIAENAGLEGYVITSKVAELEKGQGFNA
ATGEYGDLVKSGVIDPVKVTRSALENAASIASLLLTTETLVVEKKEEEPADAGHGHGHAH
NT seq 1623 nt   +upstreamnt  +downstreamnt
atggcgaagatcctgaagttcgacgaggacgcccgtcgcgccctcgagcgcggcgtcaac
aagcttgccgacacggtcaaggtgacgatcggccccaagggccgcaacgtcgtcatcgac
aagaagttcggcgctcccaccatcaccaacgacggtgtcaccatcgcccgcgaggtcgag
gtcgaggacccgttcgagaacctcggcgcccagctggtgaaggaggtggcgaccaagacc
aacgacatcgctggtgacggcaccaccaccgccaccgtcctcgcccaggcgctcgtacgc
gagggcctgaagaacgtcgccgcgggtgcctccccggccgccctgaagaagggcatcgac
gccgcggtcaaggccgtgtccgaggaactcctcgcgaccgcccgcccgatcgaggagaag
tccgacatcgccgccgtcgccggtctgtccgctcaggacagccaggtcggcgagctcatc
gccgaggccatggacaaggtcggcaaggacggtgtcatcaccgtcgaggagtccaacacc
ttcggtctggagctcgacttcaccgagggcatggccttcgacaagggctacctgtcgccg
tacttcgtcacggaccaggagcgtatggaggccgtcctcgacgacccgtacatcctgatc
caccagggcaagatcggcgccatcgccgacctgctgccgctgctggagaaggtcatccag
tccaacgcctcgcggccgctgctgatcatcgccgaggacgtcgagggcgaggccctgtcg
accctggtcgtcaacaagatccgcggcaccttcaacgccgtcgccgtgaaggccccgggc
ttcggcgaccgtcgcaaggcgatgctgcaggacatggcgaccctgaccggcgccgaggtc
atctccgaagaggtcggcctcaagctcgaccaggtcggcctggacgtgctcggctccgcc
cgccgtgtcaccgtcaccaaggacgacaccacgatcgtcgacggcgccggcaactccgag
gccgtccagggccgcgtcgcccagatcaagtccgagatcgagaacacggactccgactgg
gaccgcgagaagctccaggagcgcctcgcgaagctggccggcggcgtgtgcgtcatcaag
gtcggcgccgccaccgaggtggagctgaaggagaagaagcaccgtctggaggacgccatc
tccgcgacccgcgccgcggtcgaggagggcatcgtctccggtggtggctccgcgctcgtc
cacgccgtgaaggtcctcgaggacaacctcggcaagaccggcgacgaggccacgggtgtc
gccgtcgtccgcaaggccgccgtcgagccgctgcgctggatcgcggagaacgccggcctg
gagggctacgtcatcacctccaaggtcgccgagctggagaagggccagggcttcaacgcc
gccaccggcgagtacggcgacctggtcaagtccggtgtcatcgacccggtcaaggtcacc
cgctccgccctggagaacgccgcctccatcgcctccctcctcctcacgaccgagaccctg
gtcgtcgagaagaaggaagaggagccggccgacgcgggccacggccacggccacgcccac
tga

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