Streptomyces graminofaciens: SGFS_075830
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Entry
SGFS_075830 CDS
T09325
Name
(GenBank) putative uncharacterized protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sgrf
Streptomyces graminofaciens
Pathway
sgrf03030
DNA replication
sgrf03430
Mismatch repair
sgrf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sgrf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SGFS_075830
03430 Mismatch repair
SGFS_075830
03440 Homologous recombination
SGFS_075830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgrf03032
]
SGFS_075830
03400 DNA repair and recombination proteins [BR:
sgrf03400
]
SGFS_075830
Enzymes [BR:
sgrf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SGFS_075830
DNA replication proteins [BR:
sgrf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SGFS_075830
DNA repair and recombination proteins [BR:
sgrf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SGFS_075830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TerD
RNase_T
BRCT
PTCB-BRCT
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
BBC36289
UniProt:
A0ABN5VS14
LinkDB
All DBs
Position
complement(8433868..8435787)
Genome browser
AA seq
639 aa
AA seq
DB search
MSLASASLDLPAMGDYARDWALVDVETSGLVARRDRVLSVAVVTIGPDGEQTGEFSTLLD
PGCDPGPVEVHGLTVERLQGAPTFDQVAGRIGAMLQDRVLVAHNAQFDYDFLAYEFARAR
MWLPVSQRLCTLALNRQVDPPTDDMKLGTLAAHYGVPQQRAHDALDDTRVLAGILRASLR
EAARLDLPLPLVSCPPRAESQFTPKPPKTPCAYRNPGRMAPGGPLLQGMKIAITGETAHA
RAELVGRAVAAGLNMMTSVSRHTSVLVTNESASRSAKARRAAAEGVPVIDEHTFLRLLAD
VRAGTVHEATTTSAAIAPVKEPVSEPTMATARAPEPESTPAPVPEVPVLPPPSRGATVPA
PHPPGDSTGTLAKPLVSRRVLVLGGTHADAAAARTRVVELGGSAAVNLSASVTDVILLAG
GENDHRMSRITALELPLHDADWLISPTATDPAAAAAVRPKEPHVMPRGGVIDLPIPYVRP
SPEWYVTASWAPQADCEIDVVAFILDDDEQVTFDEDFIFYGAPESPAGTVRLLTGGPAEQ
TIALDLASLPPATRKVVVAAAIDGPATFGTVGAIQISAAPGNSGSPLTRATLDAATTERT
MLLAEIYRRGPAWRLRAVGQGYDHGLDALARGYGVDIAD
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgagtctcgcctccgcctccttagacctgcccgccatgggcgactacgcccgcgactgg
gcgctggtcgacgtggagacttccgggctcgtggccaggcgggacagggtgctgtccgtc
gcggtggtgacaatcggaccggacggcgagcagaccggggagttctccaccctgctcgac
ccgggatgcgatccgggaccggtggaggtgcacggactgaccgtcgagcgactgcagggt
gcgccaaccttcgaccaggttgccgggcggatcggagcgatgctccaggaccgggtcctg
gtcgctcacaacgctcagttcgactacgacttcctggcctacgagttcgcccgtgcccgg
atgtggctgccggtgtcccagcggctctgcaccttggctttaaatcgtcaggtggatccg
ccgacggacgacatgaaactgggcacgctcgccgcccactacggcgtaccgcagcagcgc
gcgcacgatgcgctggacgacacccgggtgcttgccgggatcctgcgggcttcgctgcgc
gaggcggcgcggctcgatctgcccttgcctctggtgagttgcccaccgcgggcggaatcg
cagttcacgccgaagccgcccaagaccccgtgcgcctaccgcaatccggggcgcatggct
cccggcgggcctctgttgcaggggatgaagatcgcgattaccggtgagaccgcacacgcg
cgggcggagctggtcgggcgggccgttgccgccgggctgaacatgatgacctccgtgagc
cggcacaccagcgtgctcgtcaccaacgagtcggcgtcccggtccgcgaaggcccggcgc
gcagccgccgagggcgtgccggtcatcgacgagcacacctttctgcggctgctggccgac
gtgcgggccgggacagtacatgaggcgacgaccacttccgccgcgatcgcaccggtgaaa
gagccggtgagcgagccgacaatggcaacagctcgggcccccgaacccgaatccacccca
gcgcctgtcccggaagtgcctgtcctgccgccaccctcccgcggcgcaaccgtccccgct
ccgcacccaccgggcgactcgacaggcaccttggccaagccgctggtgagccgccgggtg
ctggtgcttggcggtactcatgccgatgccgccgcggctcgtacgcgcgtcgtcgagctg
ggcggatccgcagcggtcaacctgtccgccagtgtcaccgacgtcatccttctcgccggc
ggtgagaacgaccaccgcatgagccgtatcaccgcccttgagctccccctgcacgacgcg
gactggctcatttctccgactgccaccgaccctgctgcggcggcggctgtccggccgaag
gagccgcacgtgatgccgaggggcggcgtcatcgacctgcccatcccctacgtcagaccc
tcgcccgagtggtacgtcaccgccagttgggctccgcaggcagactgtgagatcgacgtc
gtcgccttcatcctcgacgatgacgagcaggtgaccttcgacgaggacttcatcttctac
ggcgcccctgaaagccccgccggcaccgtgcggctcctcaccggcggtcccgccgaacag
accatcgccctcgatctcgcgtccctgccgcccgctacccgcaaggtcgtcgtcgccgcg
gccatcgacggcccggccaccttcgggacggtcggcgcgatccagatcagtgcggctccc
ggcaacagcggatcacccctcacccgggccaccctggacgccgcgacaaccgaacgcacc
atgctcctcgcggagatctaccgcaggggcccggcgtggcgcctgcgcgccgtcgggcag
ggctacgaccacggcctcgatgccctcgcacggggatacggggtcgacatcgccgactga
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