Streptomyces graminofaciens: SGFS_086150
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Entry
SGFS_086150 CDS
T09325
Name
(GenBank) PolA protein
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sgrf
Streptomyces graminofaciens
Pathway
sgrf03030
DNA replication
sgrf03410
Base excision repair
sgrf03420
Nucleotide excision repair
sgrf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sgrf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SGFS_086150
03410 Base excision repair
SGFS_086150
03420 Nucleotide excision repair
SGFS_086150
03440 Homologous recombination
SGFS_086150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgrf03032
]
SGFS_086150
03400 DNA repair and recombination proteins [BR:
sgrf03400
]
SGFS_086150
Enzymes [BR:
sgrf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SGFS_086150
DNA replication proteins [BR:
sgrf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SGFS_086150
DNA repair and recombination proteins [BR:
sgrf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SGFS_086150
NER (nucleotide excision repair)
GGR (global genome repair) factors
SGFS_086150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
DNA_pol_lambd_f
HHH_5
HHH_2
NYN_YacP
Imm50
Motif
Other DBs
NCBI-ProteinID:
BBC37321
LinkDB
All DBs
Position
9577998..9580724
Genome browser
AA seq
908 aa
AA seq
DB search
MAETASKTTDKTAGGTRPRLMLMDGHSLAYRAFFALPAENFTTASGQPTNAIYGFASMLA
NTLRDEAPTHFAVAFDVSRKTWRSEEFTEYKANRSKTPDEFKGQVELIGELLDAMRVSRF
AIDGFEADDVIATLVTQAEAEGFEVLIVTGDRDSFQLVTEHTTVLYPTKGVSELTRFTPE
KVFEKYGLTPAQYPDFAALRGDPSDNLPGIPGVGEKTAAKWINQFGSFAELVERVEEVKG
KAGQNLRDHLESVKLNRRLTEMVRTVELPKGVTDLERAPYDRKTLAMILDTLEIRNPSLR
ERLLAVDPGAEEADASAPVAAGVEVDGSVLGSGELAPWLAEHGTELLGVATVDTWALGAG
SVAEVALAAAQGAAAWFDPTQIDEADEQAWAAWLADAARPKVFHNAKGAMRVFAEHGWSV
EGVGMDTALAAYLVKPGRRSFDLDALSLEYLGRELAPAATADGQLAFGADEGAEADALMV
QARAILDLGEAFGERLAEVGAAELLRDMELPTSALLARMERHGIAADKAHLEAMEQMFAG
AVQQAVKEAHAAAGHEFNLGSPKQLQEVLFGELGLPKTKRTKTGYTTDADALAWLATQTD
NELPVIMLRHREQAKLRVTVEGLIKTIAADGRIHTTFNQTVAATGRLSSVDPNLQNIPVR
TDEGRAIRRGFVVGEGFDSLMTADYSQIELRVMAHLSEDEGLIEAFTSGEDLHTTVASQV
FSVERSAVDAEMRRKIKAMSYGLAYGLSAFGLSQQLNIEAGEARALMDTYFERFGGVRDY
LRRAVDEARATGYTATLFGRRRYLPDLNSDNRQRREAAERMALNAPIQGTAADIVKIAML
NVGRALDEAGLASRMLLQVHDEVVLEIAPGERERAEELVRREMAAAVDLKAPLDVSVGHG
ADWESAAH
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
gtggcagaaacagcatcgaagacgaccgacaagaccgccggcggcacgcggccccgcctg
atgctcatggacgggcactccctggcctaccgcgcgttcttcgcgctgcccgcggagaac
ttcacgaccgcgtccggccagccgaccaacgcgatctacggcttcgcgtcgatgctcgcc
aacacgctgcgcgacgaggcgcccacgcacttcgcggtggcgttcgacgtctcccgcaag
acctggcgctccgaggagttcacggagtacaaggcgaaccgttccaagaccccggacgag
ttcaagggccaggtcgagctgatcggcgagctgctcgacgcgatgcgtgtctcgcgcttc
gcgatcgacggcttcgaggccgacgacgtcatcgccaccctcgtcacccaggccgaggcc
gagggcttcgaggtcctcatcgtcaccggcgaccgtgactccttccagctcgtcaccgag
cacaccaccgtgctctaccccacgaagggcgtctcggagctgacccggttcaccccggag
aaggtgttcgagaagtacggcctgaccccggcccagtaccccgacttcgcggcgctgcgc
ggcgacccgtcggacaacctccccggcatccccggcgtcggcgagaagaccgccgcgaag
tggatcaaccagttcgggtcgttcgccgagttggtcgagcgcgtcgaggaggtcaagggc
aaggcgggccagaacctccgcgaccacctggagtcggtcaagctcaaccgccgtctcacg
gagatggtgcgtacggtcgaactgcccaagggcgtcaccgacctggagcgcgccccgtac
gaccgcaagacgctcgcgatgatcctggacaccttggagatccgtaacccctcgctgcgc
gagcgcctgctggccgtcgacccgggcgccgaggaggccgacgcgagcgcgccggtcgcc
gcgggcgtcgaggtggacggctcggtgctcggctcgggcgagctggctccctggctcgcc
gagcacggcacggagctcctcggtgtggccacggtcgacacctgggcgctgggcgcgggc
tcggtcgcggaggtcgcgctcgcggcggcccagggagcggccgcctggttcgacccgacg
cagatcgacgaggccgacgagcaggcgtgggcggcctggctcgccgacgcggcccggccg
aaggtgttccacaacgccaagggcgcgatgcgggtcttcgccgagcacggctggtcggtc
gagggcgtcggcatggacaccgcgctcgccgcctacctggtcaagccgggccgccgctcc
ttcgacctggacgcgctgtccctggagtacctgggccgtgagctggcccccgccgccacg
gccgacggacagttggccttcggcgcggacgagggcgccgaggccgacgcgctcatggtg
caggcccgcgcgatcctcgacctcggcgaggccttcggggagcgcctggcggaggtgggc
gcggccgagctgctgcgggacatggagctgcccacgtccgcgctgctggcccgcatggag
cggcacggcatcgcggcggacaaggcccatctggaggccatggagcagatgttcgccggt
gccgtgcagcaggcggtgaaggaggcgcacgcggcggcggggcacgagttcaacctgggc
tcgcccaagcagctccaggaggtcctcttcggcgagctgggcctgcccaagaccaagcgc
acgaagacgggctacaccacggacgcggacgcgctcgcctggctggccacgcagacggac
aacgaactgccggtcatcatgctccgccaccgcgagcaggcgaagctgcgcgtcacggtc
gagggcctgatcaagaccatcgccgcggacggccgtatccacacgaccttcaaccagacg
gtcgccgcgacgggccgcctctcctccgtcgacccgaacctgcagaacatcccggtccgc
acggacgagggccgcgccatccgccgcggcttcgtcgtcggcgagggcttcgactcgctg
atgacggcggactacagccagatcgagctgcgcgtgatggcccacctctccgaggacgag
ggcctgatcgaggcgttcacctccggcgaggacctgcacaccacggtcgcctcccaggtc
ttctcggtcgagcgctcggccgtggacgcggagatgcgccgcaagatcaaggccatgtcg
tacggcctcgcgtacggcctgtcggcgttcggcctctcccagcagctgaacatcgaggcg
ggcgaggcgcgggcgctgatggacacgtacttcgagcgcttcggcggagtacgggactat
ctgcgccgcgcagtggacgaggcgagggcgacgggctacacggcgacgctcttcgggcgc
cgccgctacctccccgacctcaacagcgacaaccgtcagcgccgcgaggccgcggagcgg
atggcgctgaacgcgcccatccagggcacggccgccgacatcgtcaagatcgccatgctc
aacgtcggccgtgccctggacgaggcgggcctggcctcccggatgctcctccaggtccac
gacgaagtcgtcctggagatcgcccccggcgagcgtgagcgcgcggaggaactggtccgc
cgcgagatggctgccgccgtggatctgaaggccccgctggacgtctcggtgggccacggc
gcggactgggagtcggcggcgcactag
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