Streptomyces graminofaciens: SGFS_087940
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Entry
SGFS_087940 CDS
T09325
Name
(GenBank) Pectate lyase
KO
K22539
pectate lyase [EC:
4.2.2.2
]
Organism
sgrf
Streptomyces graminofaciens
Pathway
sgrf00040
Pentose and glucuronate interconversions
sgrf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sgrf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
SGFS_087940
Enzymes [BR:
sgrf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
SGFS_087940
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase
Motif
Other DBs
NCBI-ProteinID:
BBC37500
LinkDB
All DBs
Position
complement(9774306..9775079)
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AA seq
257 aa
AA seq
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MIGSVAALALTGGAVATTSLLSTAGAAAVTWPTAKGSKAVSSTIEVSGTYDGRLRKFFGK
GALGDGSQDEGQDPIFELADGAVLKNVIIGVPGADGVHCKGSCTLKNVWWLDVGEDAASF
KGKSSKAVYKVIGGGAKSASDKVFQFNGAGRLSITGFKVRNFGKLVRSCGNCGKQYKRTI
TVSDIDATAPGKSLVGVNQNYGDTATLSKIRIHGDPRKKLKVCTRFQGNSSGEEPRQLGS
GADGTNCKFKPSDITYK
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
gtgatcggctcggtcgccgcgctcgccctcaccggcggagccgtcgccacgacgtcgctg
ctgtccacggccggcgccgccgccgtcacctggcccacggccaagggcagcaaggccgtc
tcctcgacgatcgaggtgtcgggcacgtacgacggcaggctgaggaagttcttcggcaag
ggcgcgctcggcgacggcagccaggacgagggccaggaccccatcttcgagctggccgac
ggcgcggtcctgaagaacgtgatcatcggtgtgccgggcgcggacggcgtgcactgcaag
ggcagctgcacgctgaagaacgtctggtggctggacgtcggcgaggacgcggccagcttc
aagggcaagtcgtcgaaggccgtgtacaaggtcatcggtggtggcgcgaaatcggcgtcg
gacaaggtgttccagttcaacggcgccggcaggttgagcatcacgggcttcaaggtgcgg
aacttcggcaagctcgtgcggtcctgcgggaactgcgggaagcagtacaagcggacgatc
accgtgagcgacatcgacgcgaccgcgcccgggaagtcgctggtaggggtcaaccagaac
tacggcgacaccgccacgctcagtaagatccgcatccacggcgacccgaggaagaagctc
aaggtgtgcacccgcttccagggcaacagctccggcgaggagcccaggcaactcggtagc
ggtgcggatggaaccaactgcaagttcaagccatctgacatcacgtacaagtaa
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