Streptomyces graminofaciens: SGFS_088360
Help
Entry
SGFS_088360 CDS
T09325
Name
(GenBank) Cobalamin biosynthesis protein CobD
KO
K02227
adenosylcobinamide-phosphate synthase [EC:
6.3.1.10
]
Organism
sgrf
Streptomyces graminofaciens
Pathway
sgrf00860
Porphyrin metabolism
sgrf01100
Metabolic pathways
sgrf01240
Biosynthesis of cofactors
Module
sgrf_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
sgrf00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
SGFS_088360
Enzymes [BR:
sgrf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.10 adenosylcobinamide-phosphate synthase
SGFS_088360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CobD_Cbib
Motif
Other DBs
NCBI-ProteinID:
BBC37542
LinkDB
All DBs
Position
complement(9821470..9822447)
Genome browser
AA seq
325 aa
AA seq
DB search
MRADRVFAYGAAAGLLGDLLLGDPRRGHPVAAFGRAAGAVERVLWRDHRGWGALHTAVCA
GGAVALGALAASAARPSRTASVALTAATTWAVVGGTSLGREARAIGHALETGDVEAARAR
LPHLCGRDPQALDADGIARAVVESVAENTSDAVVGALVWGAVGGVPGLVGFRAVNTLDAM
VGHKSPRHRRYGWASARLDDVAGWPGARLTAVLAGVAGGDRRGAVRAWRADARKHPSPNA
GPVEASFAGALGVRLGGTLSYGGRVEHRPVLNGEGRAVVVGDIERAVRLSRRVSWLALGV
SAGGALLRNRVMRRPAQRMRSGGAS
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgccgatcgcgtcttcgcgtacggcgccgccgccggcctcctcggcgacctgctg
ctcggcgatcctcgccgggggcatccggtcgccgcgttcgggcgggccgcgggtgccgtg
gagcgggtgttgtggcgggaccaccgggggtggggggcgctgcacaccgccgtgtgcgcg
gggggcgccgtggcgttgggcgccttggccgcgtctgcggcacggccgtcccgtaccgct
tccgtcgcgttgaccgccgccaccacctgggccgtcgtcggggggacttccctcgggcgg
gaggcccgggccatcgggcatgccctggagacgggggatgtcgaggccgcccgggcgcgg
ttgccccatctgtgcgggcgggatccgcaggcgctcgacgccgacgggatcgcccgggcc
gtcgtcgagtccgttgccgagaacacctccgacgcggtggtgggggcgttggtgtggggg
gccgtggggggtgtgcctgggctcgtcgggtttcgggccgtcaacacgctcgatgcgatg
gtcgggcacaagtcgcctcgccatcggcggtacgggtgggcttcggctcggctggacgac
gtcgccgggtggccgggggcccggctcaccgctgtgctcgccggcgtcgccgggggtgac
cgccgtggggccgtacgggcctggcgtgccgatgcccggaagcatccgagtcccaacgcc
gggcctgtggaggcgtcgttcgcgggggcgctgggggtgcggctgggtgggacgttgtcg
tacggggggcgggtcgagcaccggcctgtgctgaatggggaggggcgggctgtggtggtc
ggggacatcgagcgggccgttcggttgtcccggcgggtgagttggctggcgttgggggtc
agtgcgggtggcgcgttgctgcggaaccgggtcatgaggcgcccggcacagcggatgcgg
tcggggggtgcctcatga
DBGET
integrated database retrieval system
