Streptomyces graminofaciens: SGFS_088630
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Entry
SGFS_088630 CDS
T09325
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sgrf
Streptomyces graminofaciens
Pathway
sgrf03030
DNA replication
sgrf03430
Mismatch repair
sgrf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sgrf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SGFS_088630
03430 Mismatch repair
SGFS_088630
03440 Homologous recombination
SGFS_088630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgrf03032
]
SGFS_088630
03400 DNA repair and recombination proteins [BR:
sgrf03400
]
SGFS_088630
Enzymes [BR:
sgrf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SGFS_088630
DNA replication proteins [BR:
sgrf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SGFS_088630
DNA repair and recombination proteins [BR:
sgrf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SGFS_088630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
Rv2179c-like
HisKA_3
PTCB-BRCT
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
BBC37569
UniProt:
A0ABN5VVT5
LinkDB
All DBs
Position
complement(9847142..9848140)
Genome browser
AA seq
332 aa
AA seq
DB search
MLEDRTTAASQAPWPAAYPKGYAVVDVETTGLARDDRIISAAVYRLDARGEVEDHWYTLV
NPERDPGPVWIHGLTSDVLEGAPLFRDIAEEFASRLADRVLVAHNAVFDWSMIAREYARA
EIEAPVRQRLCTIALSKELGLPLANHKLESLAAHFGVVQQRAHHALDDARVLAEAFRPSL
HAAARDGVRLPLLECRPLTEWAASPSIGRQATGPGGYRSSGGYGAGSWRPSRKRPPCPHP
NPGRYEEGKPLKQGMRVAFSGDTSVDRELLEDRAVEAGLHVATSLSRVTSLLVTNDPDSG
TSKVVKARQYGTPVIDEAAFGQLLRDVEPADG
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaagaccgtacgaccgcagcgtcccaggcaccttggccggccgcgtatccgaag
gggtacgcggtcgtcgacgtggagaccaccgggctggcccgggacgaccggataatctcc
gcggccgtgtacagactggacgcgcggggcgaggtcgaggaccactggtacacgctggtc
aatccggagcgggacccgggtccggtgtggatccacggtctgacgagcgacgtgctggaa
ggggcgcccctgttccgggacatcgccgaggagttcgcctcccggctcgcggaccgggtg
ctcgtcgcgcacaacgcggtcttcgactggtcgatgatcgcccgggagtacgcgcgcgcg
gagatcgaggcgccggtacggcagcggctgtgcacgatcgcgctgtcgaaggagctgggg
ctgccgctcgccaaccacaagctggagtcgctcgccgcgcacttcggggtcgtgcagcag
cgggcgcaccacgcgctggacgacgcgcgggtgctggcggaggcgttccggccgagtctg
cacgcggcggcgcgggacggcgttcggctgccgttgctggagtgccgaccgctcacggag
tgggccgcgtcaccctcgatcggccgccaggcgaccggccccggcggctatcggtcctcg
gggggctacggcgcgggcagttggcgcccctcccgcaagcggccgccgtgcccgcacccc
aaccccggccgttacgaagagggcaaaccgctcaagcagggcatgcgggtcgccttctcc
ggggacacctccgtcgaccgggagctgctggaggaccgggcggtggaggcgggcctgcat
gtggcgacgagcctgtcccgggtgaccagcctcctcgtcaccaacgacccggactcgggc
acgtcgaaggtggtcaaagcccggcagtacggcacccccgtgatcgacgaggccgccttc
ggacagctgctgcgcgatgtggagcccgccgacggatga
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