Streptomyces graminofaciens: SGFS_095030
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Entry
SGFS_095030 CDS
T09325
Name
(GenBank) Nuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
sgrf
Streptomyces graminofaciens
Brite
KEGG Orthology (KO) [BR:
sgrf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgrf03400
]
SGFS_095030
DNA repair and recombination proteins [BR:
sgrf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SGFS_095030
Archaeal homologous recombinant proteins
SGFS_095030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_27
AAA_29
SMC_N
Hs1pro-1_N
AAA
Motif
Other DBs
NCBI-ProteinID:
BBC38209
LinkDB
All DBs
Position
10561247..10564270
Genome browser
AA seq
1007 aa
AA seq
DB search
MRLHRLDITAFGPFGAAQSVDFDELSAAGLFLLHGPTGAGKTSVLDAVCYALYGSVPGAR
QSGQGLGLRSDHAVPATRTEVRLELTVAGRRLEITRQPPWERPKKRGAGTTLDKAQSWLR
EYDAVTGAWKDLSRSHQEIGEEVTQLLGMSREQFCQVVLLPQGDFARFLRADAEARGRLL
GRLFDTHRFAEVEKRLAERRRTTEARVREGDTELLAVAHRMQEAAGDALDLPELAPGDPG
LAEAVLSWAAVARSTARERLTIAHCARTAAESARSAAERVLDDVREVARLQRRFAEARER
AVRLEERADAYREARVRMERARKAEAVAPALDLRDAAEAEHRKAAEEEARARALLPESYA
DAGAAGLATAARRAAEELGGLDSARRAEPRLAELDTERADLDRQERADEEAFQDAEGWLA
RWEATRAELHTRIESAQADATRAEQLAVQREPADKRLRAAHERDRLGRDTDDAQAQALRA
GERANDARAHWLDLREQRLKSIAAELAAGLLDGEPCAVCGAVEHPEPARKIAGHVDREAE
EQALAVYQRADEERAEAERRLGDVRQALAAASAEAGDTPADRLAQQVAELESAYAQARRG
ASGLHLAQEQLRGAEQERERRIAAQQEAAVRAASRNTRRDALERERAELEAELAQARGAA
ESVAARAAQLERHAERLSGAADAARAGDDSAQRLKDADARLADAAFRAGFDTPQAASAAL
LDDTAHRELQRRLDAWQTEDAQVRAVLAEAETAAAAEQPPADLTAAERAASAAARRLQDA
VSAWDAAERRSAALDRHSVRATASVRRLAPLREEYDRVARMAGLAAGTSADNERRMRLEA
YVLAARLEQVAAAATVRLQRMSSGRYTLVHSDDRAGRGRSGLGLHVVDAWTGRERDTATL
SGGETFFASLALALGLADVVTDEAGGVRLDTLFIDEGFGSLDDQTLDEVLDVLDALRERD
RSVGIVSHVGDLRRRIHAQLEVVKGRSGSTVRQGAYLPSGRRGSGEE
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgcaccggctcgacatcacggccttcgggcccttcggcgcggcccagagcgtc
gacttcgacgagttgtccgccgccgggctcttcctgctgcacggcccgaccggcgcgggc
aagacatccgtcctggacgccgtctgctacgcgctctacggctcggtgccgggcgcccgg
cagagcggtcaggggctgggcctgcgcagcgaccacgcggtgcccgcgacgcgcaccgag
gtgcgactcgaactcaccgtcgccgggcgccggttggagatcacccggcagccgccgtgg
gaacgccccaagaagcgcggagcgggaaccaccctcgacaaggcgcagagctggctgcgc
gagtacgacgcggtcaccggcgcctggaaggacctcagccgctcccaccaggagatcggc
gaggaggtcacccagcttctcgggatgagccgcgagcagttctgccaggtcgtgctgttg
ccccagggcgacttcgcccgttttctgcgcgccgacgccgaggcgcgcggcaggctgctc
ggccggctcttcgacacccaccgcttcgccgaggtcgagaagcgcctcgccgagcggcgg
cggacgaccgaggcccgggtccgcgagggcgacacggaactgctcgccgtcgcccaccgt
atgcaggaggcggccggggacgcactggacctgcccgaactggccccgggcgacccgggg
ctcgccgaggccgtgctgagctgggccgccgtcgcccgcagcaccgcccgtgagcggctc
accatcgcccactgcgcgcgtacggccgccgagtcggcgcggtccgccgccgagcgcgtc
ctggacgacgtacgcgaagtggcgcggctgcagcggcggttcgcggaggcgcgggagcgg
gccgtgcggctggaggagcgggccgacgcttaccgggaggcgcgggtccggatggagcgg
gcccgcaaggcggaggccgtggcgcccgcgctggacctgcgggacgcggccgaggccgag
caccgaaaggccgccgaggaagaggcacgcgcgcgtgccctgctgcccgagtcgtacgcc
gacgccggggccgccgggctcgcgaccgccgcgcgcagggccgccgaggagctgggcggc
ctggactcggcccggcgcgcggaaccgaggctggccgagctcgacaccgaacgcgcggac
ctggaccgccaggagcgggccgacgaggaggcgttccaggacgccgagggctggctcgcc
cggtgggaggcgacccgcgccgagctgcacacccgcatcgagtccgcccaggcggacgcc
acccgcgccgaacagctcgccgtgcagcgcgagcccgccgataagcggctcagggccgct
cacgaacgtgaccggctcggccgtgacacggatgacgcccaggcgcaggctctccgggcg
ggcgagcgggcgaacgacgcgcgcgcccactggctcgacctcagggaacagcgcctcaag
agcatcgcggcggagctggccgccggactcctcgacggtgagccctgcgcggtctgcggc
gccgtggagcaccccgagcccgcccgcaagatcgccgggcacgtcgaccgcgaggcggag
gagcaggccctcgccgtgtaccagcgggccgacgaggagcgcgccgaggccgagcggcgg
ctcggtgacgtacgccaggcgctggccgccgcgagcgccgaagccggcgacacgccggcc
gatcggcttgcccagcaggtggccgagttggagagcgcgtacgcgcaggcgcggcggggc
gcctccggtctgcacctcgcccaggagcagctgcgcggcgccgagcaggagcgggagcga
cggatcgccgcccagcaggaggcggcggtccgggccgcgtcccgcaacacccggcgggac
gcgctggagcgggaacgggccgagctggaggccgagttggcgcaggcgcggggcgccgcc
gagagcgtggccgcgcgggccgcgcagctggagcggcacgcggagcggctgtccggggcg
gctgacgcggcgcgggccggggacgacagcgcgcagcggctcaaggacgccgacgcgcgt
ctcgccgacgcggctttccgcgccgggttcgacaccccgcaggccgcgtcggccgcgctc
ctcgacgacacggcccaccgcgaactccaacgccgcctcgacgcctggcagacggaggac
gcccaggtgcgggccgtactcgccgaggccgagaccgcagccgccgcggaacagccgccc
gccgacctcacggccgccgagcgggccgcctcggccgccgcccggcggctccaggacgcc
gtctccgcgtgggacgcggccgagcggcgcagcgccgcgctcgaccggcactccgtgcgc
gcgaccgcctccgtgcgacggctggcgccgctgcgcgaggagtacgaccgggtggcccgc
atggccggactcgcggccggcacctccgcggacaacgaacgcaggatgcgcctggaggcg
tacgtcctcgcagcccgcctggaacaggtcgccgccgccgccaccgtacggctccagcgc
atgtcctccggccgctacaccctcgtccactccgacgaccgggccgggcgcggtcgcagc
gggctcgggctgcatgtcgtcgacgcgtggacgggccgggagcgggacacggcgacgctc
tccggcggcgagacgttcttcgcctccctcgcgctcgccctcggcctcgccgacgtcgtc
accgacgaggcgggcggggtccggctggacaccctgttcatcgacgagggcttcggcagc
ctcgacgaccagaccctcgacgaggtcctcgacgtcctcgacgcgctccgtgaacgcgac
cgcagtgtcggcatcgtcagccacgtcggcgacctgcggcggcgcatccacgcgcagctg
gaggtggtgaaggggaggtcggggtcgaccgtacggcagggggcctatctgccgagcggt
cgccgggggagcggcgaggagtag
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