Streptomyces graminofaciens: SGFS_095890
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Entry
SGFS_095890 CDS
T09325
Name
(GenBank) Pectate lyase
KO
K01051
pectinesterase [EC:
3.1.1.11
]
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sgrf
Streptomyces graminofaciens
Pathway
sgrf00040
Pentose and glucuronate interconversions
sgrf01100
Metabolic pathways
sgrf02020
Two-component system
sgrf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sgrf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
SGFS_095890
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SGFS_095890
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SGFS_095890
Enzymes [BR:
sgrf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
SGFS_095890
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
SGFS_095890
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectinesterase
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
BBC38295
LinkDB
All DBs
Position
complement(10650937..10652991)
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AA seq
684 aa
AA seq
DB search
MSENRNKARHRKRKTALVVGLPLALTAAGTMAYGAVFGLFGEDAQPKASAAVPAWATQAA
DGFASVDALGQKGTYGGRDGKTVTVKTLADLEKYATATEPYVIVVAATINMDPVGKEIKV
KSDKTIVGSGTSGQIVGGGFFLGSGVHNVIIRNLTIRDSYQGTWNDKEHDFDAIQMDNAH
HVWIDHNDLRHMADGLIDVRKDSTNVTVSWNKLSQDNKAFGIGWTENVVTDITIHHNWIR
ETEQRNPSTDNAAHAHLYNNFLEDVAGTDIKSSYGNYSRGRTKMVLENSYFQGVNNPVMK
DSTATVVQKGNTFVGTTGRNDSGGTAFDPKSYYSYTLDKTADVPALLKSGTGPRSSIGTT
STTKAAAATTLVVAKDGSGQYKTVQAAVDAVPANNSSRIVISVKPGTYREVVKVPANKPH
VTIQGAGSSRKDTTIVYGNAAGMQKPDGSGTYGTPGSATLSVQSDDSQVRNLTVTNDFDE
AKHQDIANQAVALLTSADKIVLDGVIVNGDQDTLELETAAKDKPGRVYIANSYITGNVDF
IFGRATVVVDKSVITLKKRWNGTSAGYVTAPSTPANRKGILINKSAINGDVSAGSFFLGR
NWHPGGDTTVDPQTTIRETTLSAAIKSTPWSDMGGFSWKDDRFAEYKNTGAGSGGASGNR
PQLTDAQAADQEVADWLGGWTPGA
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgagaaccgcaacaaggcccgccaccgcaagaggaagacggcgctcgtcgtcggc
ctccccctggccctgaccgccgcagggaccatggcctacggcgcggtcttcgggctcttc
ggcgaggacgcccagccgaaggcctccgcggcggtccccgcctgggccacccaggccgcc
gacggcttcgcctcggtcgacgcgctcggccagaagggcacctacggcggccgggacggc
aagacggtcaccgtgaagaccctcgccgacctggagaagtacgcgaccgccaccgagccg
tacgtcatcgtcgtggccgcgacgatcaacatggacccggtcggcaaggagatcaaggtc
aagtccgacaagaccatcgtcggctccggcacctccgggcagatcgtcggcggtggtttc
ttccttggctccggcgtccacaacgtcatcatcaggaacctgacgatccgggactcctac
cagggcacctggaacgacaaggagcacgacttcgacgcgatccagatggacaacgcccac
cacgtctggatcgaccacaacgacctgcggcacatggccgacggcctcatcgacgtccgc
aaggactccacgaacgtgaccgtctcctggaacaagctcagccaggacaacaaggccttc
ggcatcggctggaccgagaacgtcgtcaccgacatcacgatccaccacaactggatccgt
gagaccgagcagcgcaacccgtccaccgacaacgccgcccacgcgcacctctacaacaac
ttcctggaggacgtggcgggcaccgacatcaagtcgtcgtacggcaactactcgcgcggc
aggacgaagatggtcctggagaactcctacttccagggcgtcaacaaccccgtcatgaag
gacagcacggcgaccgtcgtccagaagggcaacaccttcgtcggcaccaccgggcgcaac
gacagcggcggcaccgccttcgacccgaagtcgtactacagctacacgctcgacaagacg
gcggacgtgcccgcgctcctgaagtccggcacgggaccgcggagttccatcggcacgaca
tccaccaccaaggccgccgcggcgaccacgctggtggtcgccaaggacggctccggccag
tacaagacggtgcaggcggccgtggacgccgtccccgcgaacaactcctcgcggatcgtg
atctccgtgaagcccggcacgtaccgcgaggtcgtcaaggtccccgccaacaagccgcac
gtcaccatccagggcgcgggcagcagccgcaaggacaccacgatcgtctacggcaacgcg
gccggcatgcagaagccggacggctcgggcacctacggcacccccggcagcgccacgctg
tccgtccagtcggacgactcccaggtccgcaacctgaccgtcaccaacgacttcgacgag
gccaagcaccaggacatcgccaaccaggcggtggcactgctgaccagcgccgacaagatc
gtcctcgacggtgtgatcgtcaacggcgaccaggacaccctggagctggagaccgccgcc
aaggacaagccgggccgggtctacatcgccaactcgtacatcacgggcaacgtcgacttc
atcttcggccgggccacggtcgtcgtcgacaagtcggtcatcaccctgaagaagcgctgg
aacggcacctccgccgggtacgtcaccgcacccagcacgccggccaaccgcaagggcatc
ctgatcaacaagtccgcgatcaacggtgacgtgtccgccgggagcttcttcctcggccgt
aactggcaccccggcggcgacaccaccgtcgacccgcagaccacgatccgtgagacgacc
ctcagcgccgcgatcaagtccacgccctggtccgacatgggcggcttctcctggaaggac
gaccgcttcgccgagtacaagaacaccggcgcgggctcgggcggcgcgagcggcaaccgc
ccgcagctgacggacgcgcaggccgcggaccaggaggtcgcggactggctgggcgggtgg
acgccgggcgcctga
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