Streptomyces graminofaciens: SGFS_096780
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Entry
SGFS_096780 CDS
T09325
Name
(GenBank) Diguanylate phosphodiesterase
Organism
sgrf
Streptomyces graminofaciens
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS
PAS_4
PAS_3
PAS_9
PAS_8
Hom_end
Motif
Other DBs
NCBI-ProteinID:
BBC38384
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Position
10750745..10752886
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AA seq
713 aa
AA seq
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MSAEPDGPEDRLRRFATIWSRAVFPVTSTSLTRPEFEELLLPLARRLSEALKARTYGAEE
GRAVGAALVEAHCTEPEALGRSLDCVDAYLVLYCGGDGPQEDLRARAARLQSAMAAGYAE
ALRQRTLAEQEAIARAALEAQGAVARALHATEARFRAVFEGAAIGIGIADLDGNILQTNG
ALQRMFGMTEQTLRSRPVRALTHGEDAPQVWRLYEELVRGEREHYHTEKAFNRPDGTVLW
TNLTVSLLRDADGRPQYQLALMEDTTERRLLNLRLRYEATHDALTGLPNRTLFFERLEKA
LAAADGQRFGLCYLDLDGFKAINDSLGHAAGDRLLVEVADRLQSCATAPGEMVARLGGDE
FVALTTGTDTEREVDELADRIMNALVTPVRIDGRELLVRGSIGIVEGPAGERGPAEVLRS
ADITMYRAKSAGGNRYEVADAEADARAITRHGLTTALPAALDRGEFFIEYQPLVHLGDGT
VHGAEALVRWLHPQHGVLGPDRFIPLAERTGLIVPLGRWVLEQSVRQACAWQERNGGTAV
KPLRVNVNLSPCQLTHPGLVQDTVDILERAGLEPEALCLEVTESALIGADDSLLKPLRRL
AEMGVDIALDDFGTGYSNLANLRRLPVSVLKLDRSFTQSMQRFPADPVDLKIVDGIVSLA
HSLNLTVTVEGVETGAQAEQLRILGCDTAQGWYYARPGPPDRLHELALVDATG
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgcggagccggacgggccggaggacagactccgcaggttcgcgacgatctggagc
cgggccgtgttccccgtgacctccacgtcgctgacccgccccgagttcgaggaactgctc
ctgccgctcgcacggcggttgagcgaggcgctcaaggcccgcacgtacggcgccgaggag
ggcagggcggtcggcgcggccctcgtcgaggcgcactgcaccgaacccgaggccctcggc
cgcagcctcgactgcgtggacgcctacctggtgctctactgcggcggcgacggcccccag
gaggatctgcgcgcccgcgccgcccggctgcagtccgcgatggccgccggatacgccgag
gcactgcggcagcgcaccctggccgagcaggaggccatcgcccgcgcggcactggaggcc
cagggtgccgtcgcccgggccctgcacgcgaccgaggcccgcttccgcgccgtcttcgag
ggcgccgccataggcatcggcatcgccgacctcgacggcaacatcctccagaccaacggc
gccctgcagcgcatgttcggcatgaccgagcagaccctgcgctcacgtcccgtccgtgcc
ttgacccacggcgaggacgcgccccaggtctggcgcctgtacgaggagttggtccgcggc
gagcgcgagcactaccacaccgaaaaggcgttcaaccggcccgacggaacggtcctgtgg
accaacctcacggtctccctcctgcgcgacgccgacggccgcccccagtaccaactggcc
ctcatggaggacaccaccgagcgccgtttgctcaacctccgcctgcggtacgaggccacg
cacgacgcgctcaccggactgcccaaccgcaccctcttcttcgagcgactggagaaggcc
ctggcggcggccgacggccagcggttcggcctgtgctacctcgacctcgacggcttcaag
gccatcaacgacagcctcggccacgcggccggcgaccggctgctcgtcgaggtcgccgac
cggctgcagtcctgcgcgaccgcccccggtgagatggtcgcgcggctcggcggcgacgag
ttcgtggccctgaccaccggcaccgacaccgagcgcgaggtcgacgaactcgccgaccgc
atcatgaacgcgctggtcacccccgtccgcatcgacggccgtgaactcctcgtacggggc
agcatcggcatcgtcgagggcccggcgggggagcgcggcccggcggaggtgctgcgcagc
gccgacatcacgatgtaccgggccaagtcggcgggcggcaaccgctacgaggtcgccgac
gcggaggccgacgcccgcgccatcacccggcacggactcaccaccgcgctgcccgcggcc
ctggaccggggcgagttcttcatcgagtaccagccgctcgtccacctcggcgacggcacg
gtgcacggtgccgaggccctggtccgctggctgcacccgcagcacggcgtgctcggcccc
gaccgtttcatcccgctcgccgagcgcaccggactgatcgtgccgctcggccgctgggtc
ctggagcagtcggtgcgccaggcctgtgcgtggcaggaacgaaacggcggcacggccgtc
aagccgctgcgcgtcaacgtcaacctgtcgccgtgccagctcacccatcccgggctggtc
caggacaccgtcgacatcctggagcgggcgggcctcgaacccgaggcgctctgcctggaa
gtgacggagtccgccctcatcggcgccgacgacagcctgctcaaaccgctgcgccgactc
gccgagatgggcgtcgacatcgccctcgacgacttcggcaccggctactccaacctggcc
aatctgcgccgcctgcccgtgagcgtcctcaagctggaccgttccttcacccagagcatg
cagcggttcccggccgatcccgtcgacctgaagatcgtcgacgggatcgtctcgctcgcc
cacagcctcaacctcacggtcaccgtggagggcgtcgaaacgggcgcccaggccgagcag
ttgcgcatactgggctgcgacacggcccagggctggtactacgcccgcccgggcccgccg
gaccggctgcacgagctggccctggtggacgcgacggggtga
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