Streptomyces graminofaciens: SGFS_096880
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Entry
SGFS_096880 CDS
T09325
Name
(GenBank) Glycosyl hydrolase, family 43
Organism
sgrf
Streptomyces graminofaciens
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_43
aBig_2
Laminin_G_3
Big_4
PKD_4
Glyco_hydro_32N
DUF5018
DUF5018-rel
Laminin_G_2
DUF7373
DUF5626
Motif
Other DBs
NCBI-ProteinID:
BBC38394
LinkDB
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Position
complement(10763901..10769108)
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AA seq
1735 aa
AA seq
DB search
MTYIAGLRGRARRGAGRLAGLTAASLLLGLAGPAAPAHADQSADITDGLALWYKLDATSG
TTVTDASGNGRDGTVSGTAGWSGSGQGLAFNGSDTYIKVPNDVMKGMASISVSLDVLIDD
AQSTPYFIYGFGNTSGGNGNGYLFTTGNGLRTSIATGNWSTEQNTRPSDSHNLTRGVWKQ
LTYTQTGNTGVLYEDGVEVGRNTSVTITPGAIGSGTTTANYIGKSVYTGDKLFKGKIRDF
RMYNRALTGSEVEQLSLPVAAQGVADDKVALTLGDTSGVTADLDLPKTGTTGGSSISWKS
DNTDVVSDSGKVTRPAAGEPDGHATLTATLKKGSVSDTKTFEVTVLPAFDDATAAKQAAE
ALTVHNLDDVRGNLTLPADGALGTKVSWSSAKPDVVSAEGVVHRPAHGDGGTTVELTATV
TKGDAKATRDFTAKVPELPEKQALKGYMFSYFTGEGTSDGEQLYAALSKGNDPLKWRELN
DGKPVLTSTLGEKGLRDPFIIRSPEGDKFYQIATDLRIYGNGDWDRSQRSGSKSIMVWES
TDLVNWTNQRLVKVSPDSAGNTWAPEAYYDEKLGEYVVFWASKLYDNEAHSGDTYNRMMY
ATTRDFYTFSEPKVWVDRGYSVIDSTVIQHDGTYFRLSKDERNNTSSTPNSKFIFEEKSD
SLRNLSWDAVAEGIGKGTMSAAEGPLVFKSNTEEKWYAFLDEFGGRGYIPFETTDLASGT
WTPSSSYDLPSKPRHGTVLPVTQAEYDRLLNTYQPDQIVKSAEDVKVETRIGDAPVLPAT
VIAEYADGAKRPVSVTWEDVPASKYAQAGTFTVEGTLSGDATIDVHAEVTVSEEGPDIPA
DLVLHYGFDETGGSIARDSSGHGYHGTYVRTPDFGTGVDGGSFKMSGGSSSSDSPYVKIP
NGVLKDAGSVTVSTYVKWKGGNNFQWLFGLGPDSNKYLFATPSNGGGKLFSAITKATWSG
EKQMIGGSQLTAGEWKHITVTLNGSTETAILYVDGAETARVNGVTVKPSELYDSAKDYSG
YIGKSLYSPDPYFGGEVDDFRIYNRALTPAEVLELAGNTTGIAVATHPALKVDAIVNDKD
SKVVLPLTEGSDITALAPEFTLAHGATISPASGTLHDFTEPVKYEVTGSDGKKRTWTVSA
LVMKSPVLPGLNADPNIVRFGDTFYMYPTTDGFEGWSGTQFKAYSSTDLVHWKDHGVILD
LGPDVSWADSRAWAPTIAEKNGKYYFYFCADANIGVAVSDSPTGPFKDALDKPLLKAGQY
SGQMIDPATFTDDDGQTYLYWGNGHAYVVPLNDDMVSFDASKVTDITPSGYNEGTFVIKR
KGTYYFMWSENDTRDENYRVAYATGSSPTGPWTKRGVILEKDLSLGIKGPGHHSVVHVPN
TDDWYIAYHRFAIPGGDGTHRETTIDKLEFDADGLIKNVVPTLESIDPVTIVHAGPNAAG
KEGDKLQLNGTLSGAGSPKWTVEEGAPCAFTDAKSAKTTLVCTDNGTYKVTLTGGRSTDT
ATVTVTNAAPKITSVTGPKAPVSVGKVATVTAKFGDPGTSDTHTCKVDWKDGTKATAGTV
EDKVCRAAHTYKKAGIRRPVITVTDDDGASVSTTLPELIVYDRAAGPAAGTGTFTSPKGA
YTADAKLTGKAAFSFSAKYGKRDTVPSGKAALDFGGGKLKFRSTGSDWLVVTGSKAVYQG
SGKVNGKSGYAFRITATDSPDTFRIKIWKKSSGKVVYDNVDAAKTKGITVGNHRR
NT seq
5208 nt
NT seq
+upstream
nt +downstream
nt
atgacgtacatcgcaggtctgcgcggccgcgcgagacgcggggcaggccggctcgccggg
ctgaccgccgcgtcactgcttctgggcctcgccggccccgccgctcccgcgcacgcggac
cagagcgccgacatcaccgacggcctggccctctggtacaagctcgacgccacctccggc
acgaccgtcaccgacgcctccggcaacggccgggacggcacggtcagcggcacggcgggc
tggtcgggcagcggccagggcctcgccttcaacggttccgacacctacatcaaggtgccg
aacgacgtcatgaagggcatggcctcgatcagcgtctccctggacgtcctgatcgacgac
gcgcagagcaccccgtacttcatctacggcttcggcaacaccagcggcggcaacggcaac
gggtacctcttcaccaccggcaacggactgcggacgtccatcgccacgggcaactggtcg
accgagcagaacaccaggccctccgactcgcacaacctgacccgtggggtgtggaagcag
ctcacctacacgcagaccggcaacacgggtgtgctgtacgaggacggcgtggaggtcggc
cgcaacacgtcggtcaccatcaccccgggtgccatcggctcgggcaccacaaccgccaac
tacataggcaagtcggtctacaccggcgacaagctcttcaagggcaagatccgcgacttc
cggatgtacaaccgggcgctcaccggctccgaggtcgagcagctctcgctccccgtggcc
gcgcagggcgtcgccgacgacaaggtcgctctcactctcggcgacaccagcggggtgacc
gccgacctggatctgccgaagaccggcacgaccggcggttcgtcgatcagctggaagagc
gacaacaccgatgtcgtctcggactccggcaaggtcacccgccccgccgccggtgagccg
gacggccacgccacgctcacggcgaccctgaagaagggctccgtcagcgacaccaagacc
ttcgaggtcacggtcctgcccgccttcgacgacgcgaccgccgcgaagcaggccgccgag
gcgctgaccgtgcacaacctcgacgacgtacgcggaaacctcactctccccgccgacggc
gccttgggcacgaaggtctcctggtcctcggcgaagccggacgtcgtctccgccgagggc
gtggtccaccgcccggcgcacggcgacggcggcacgaccgtcgagctgaccgcgaccgtc
accaagggcgacgcgaaggccacccgcgacttcaccgcgaaggtccccgagctgcccgag
aagcaggctctcaagggctacatgttcagctacttcaccggcgagggcacctcggacggc
gagcagctctacgcggccctcagcaagggcaacgacccgctcaagtggcgtgagctgaac
gacggaaagcccgttctcacctccaccctcggcgagaagggactgcgcgacccgttcatc
atccgctccccggagggcgacaagttctaccagatcgccaccgacctgcggatctacggc
aacggtgactgggaccgctcacagcgctccggcagcaagtccatcatggtctgggagtcc
accgacctggtgaactggaccaaccagcgcctggtcaaggtctcccccgactcggccggc
aacacctgggcccccgaggcgtactacgacgagaagctcggcgagtacgtggtcttctgg
gcgtcgaagctgtacgacaacgaggcgcactccggcgacacgtacaaccggatgatgtac
gcgacgacccgcgacttctacaccttcagcgagcccaaggtctgggtcgaccgcggctac
tcggtcatcgactccacggtcatccagcacgacggcacctacttccgcctctccaaggac
gagcggaacaacacctcctccacgcccaacagcaagttcatcttcgaggagaagagcgac
tccctgcgcaacctgtcgtgggacgcggtcgccgagggcatcggcaagggcacgatgagc
gccgccgagggcccgctggtgttcaagtcgaacaccgaggagaagtggtacgcgttcctg
gacgagttcggcgggcgcggctacatccccttcgagacgaccgatctcgcctcgggcacc
tggaccccgtcgtcctcgtacgacctgccgtccaagccccgccacggcacggtgctgccg
gtgacgcaggccgagtacgaccggctgctgaacacctaccagcccgaccagatcgtgaag
agcgccgaggacgtcaaggtcgagacgcgcatcggtgacgccccggtgctgcccgccacg
gtcatcgccgagtacgcggacggtgcgaagcgccccgtctcggtcacctgggaggacgtg
ccggcgtcgaagtacgcgcaggccggcaccttcacggtcgaaggcaccctgtcgggcgac
gccacgatcgacgtacacgccgaggtcacggtctcggaagagggaccggacatcccggcg
gacctggtcctgcactacggcttcgacgagaccggcggcagcatcgcccgtgactccagc
ggccacggctaccacggcacctacgtccgcacgcccgacttcgggaccggcgtggacggc
ggctcgttcaagatgtccggcggctccagcagctccgactcgccgtacgtgaagatcccc
aacggggtgctgaaggacgcgggcagcgtcaccgtctccacgtacgtcaagtggaagggc
ggcaacaacttccagtggctgttcgggctcggtcccgacagcaacaagtacctcttcgcc
actccctccaacggtggcggcaagctgttctccgcgatcaccaaggccacctggtccggt
gagaagcagatgatcggcggctcgcaactcaccgccggtgagtggaagcacatcaccgtc
acgctgaacggctccaccgagacggcgatcctctacgtggacggcgcagagacggcccgc
gtgaacggtgtcaccgtcaagccgtccgagctgtacgactcggcgaaggactactccggc
tacatcggcaagtccctgtactccccggacccgtacttcggcggcgaggtcgacgacttc
cggatctacaaccgggccctcacgcccgcggaggtcctggagctcgccggcaacaccacg
ggcatcgcggtggcgacccacccggcgctcaaggtggacgcgatcgtcaacgacaaggac
agcaaggtcgtcctgccgctgaccgagggcagtgacatcaccgccctggccccggagttc
accctcgcccacggcgcgacgatcagccccgcctccggcaccctgcacgacttcaccgag
ccggtgaagtacgaggtcaccggttcggacggcaagaagcgcacctggacggtctcggca
ctggtcatgaagagcccggttctccccggtctcaacgccgacccgaacatcgtccgcttc
ggcgacaccttctacatgtacccgaccaccgacggcttcgagggctggagcggcacgcag
ttcaaggcgtactcctccaccgacctggtccactggaaggaccacggcgtcatcctcgac
ctcgggccggacgtctcctgggcggacagcagggcctgggcgccgacgatcgccgagaag
aacggcaagtactacttctacttctgcgccgacgcgaacatcggtgtcgcggtctccgac
tcgcccaccggcccgttcaaggacgccctggacaagccactgctcaaggcgggccagtac
agcggccagatgatcgacccggcgaccttcacggacgacgacggccagacgtacctgtac
tggggcaacggccacgcctatgtggtcccgctgaacgacgacatggtctccttcgacgcc
tcgaaggtcaccgacatcacccccagcggctacaacgagggcaccttcgtcatcaagcgc
aagggcacctactacttcatgtggtcggagaacgacacacgtgacgagaactaccgggtc
gcctacgccaccggctcctcgcccaccggtccctggaccaagcgcggagtgatcctggag
aaggacctttccctcggtatcaagggccccggccaccactcggtggtccacgtcccgaac
accgacgactggtacatcgcctaccaccgcttcgccatccccggcggtgacggcacccac
cgtgaaaccaccatcgacaagctggagttcgacgccgacggcctgatcaagaacgtcgtt
cccaccctggagagcatcgatcccgtcaccatcgtccacgccggtccgaacgccgcgggc
aaggagggcgacaagctccagctgaacggcacgctctcgggcgccggcagccccaagtgg
acggtcgaggagggtgcgccctgtgccttcaccgacgccaagtcggcgaagaccacgctc
gtctgcaccgacaacggcacctacaaggtgaccctgaccggcggccgcagcaccgacacg
gcgacggtcaccgtcaccaacgcggccccgaagatcacctccgtcaccggtccgaaggcc
ccggtgtcggtgggcaaggtcgcgacggtcaccgccaagttcggcgaccccggcaccagt
gacacccacacctgcaaggtcgactggaaggacggcaccaaggcgacggccggcacggtc
gaggacaaggtctgccgcgccgcgcacacctacaagaaggccggtatccgccgaccggtg
atcacggtcaccgacgacgacggcgcctcggtgagcaccacgctccccgagctgatcgtc
tacgaccgcgcggcgggccccgcggccggcaccggcaccttcacctctccgaagggcgcc
tacacggccgacgccaagctgaccgggaaagcggcgttctccttctccgccaagtacggc
aagcgtgacaccgtgccgtccgggaaggccgctctcgacttcggcgggggcaagctgaag
ttccgctccacgggttccgactggctcgtggtcaccggttccaaggccgtgtaccagggc
tccggcaaggtcaacggcaagagcggctacgccttccggatcaccgcgaccgacagcccc
gacaccttccggatcaagatctggaagaagtccagcggcaaggtcgtgtacgacaacgtc
gacgccgcgaagacgaaggggatcaccgtaggaaaccaccgccggtag
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