Streptomyces graminofaciens: SGFS_098880
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Entry
SGFS_098880 CDS
T09325
Name
(GenBank) ABC transporter
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
sgrf
Streptomyces graminofaciens
Pathway
sgrf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sgrf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SGFS_098880
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sgrf02000
]
SGFS_098880
Transporters [BR:
sgrf02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
SGFS_098880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
BBC38594
LinkDB
All DBs
Position
10976753..10977832
Genome browser
AA seq
359 aa
AA seq
DB search
MFLRGVGGVTAGLAAASALSACGTGSSRSTTAGSGKSSKTLVVRNSGGTYGEANQKAVYD
AFTKETGIQIKVVNIAYAQLLAQIKQGRPQFDVIDTSMADVVRFKDEDATEALDYDRLKS
TRNAGIAESLMMSHGVGKNYWASVMAYRTDAFDGKKPESWADFWDTKVFKGSRALQARDA
DLPELEFALLADGVPLDKLYPLDVERAFKALDDIKGSVRKYWDTGALPGVLLGREEVVAT
SVWHGRLDALIKGGSPLAYQWNGARRQSNGFCIPKGTANLDAAYQLVDFALRPDIQAAYA
EVYPMAPVVPAAYKKLSSAAAGNLASSPEHLKSGFDLDVEWWIKNEAAVSKRWQEWVNA
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
ttgttcctgcgcggagtcggcggagtcacggcgggtctcgccgccgcgtccgccctgagt
gcctgtggcaccggcagcagccgcagcacgaccgccggtagcggcaagagctccaagacg
ctggtcgtgcgcaacagcggtggcacgtacggcgaggccaaccagaaggcggtctacgac
gcgttcaccaaggagaccggcatccagatcaaggtggtgaacatcgcgtacgcgcagctg
ctcgcccagatcaagcagggccgcccgcagttcgacgtgatcgacacctcgatggccgac
gtggtgcgcttcaaggacgaggacgcgaccgaggcgctcgactacgaccggctgaagagc
accaggaacgcgggtatcgccgagtcgctgatgatgtcccacggcgtcggcaagaactac
tgggccagcgtcatggcgtaccgcaccgacgccttcgacgggaagaagcccgagagctgg
gccgacttctgggacaccaaggtgttcaagggcagccgcgccctccaggcccgcgacgcg
gacctgcccgagctggagttcgccctcctcgccgacggcgtgcccctggacaagctgtac
cccctcgatgtggagcgcgccttcaaggccctcgacgacatcaagggatccgtccgcaag
tactgggacaccggtgccctgcccggcgtgctgctgggccgcgaggaggtcgtcgccacc
agcgtgtggcacggccgtctcgacgccctgatcaaggggggctcgccgctggcgtaccag
tggaacggcgcccgccggcagagcaacggcttctgcatccccaaggggaccgcgaacctc
gacgccgcctaccagctcgtcgacttcgcactgcgtcccgacatccaggccgcctacgcc
gaggtctacccgatggccccggtggtgcccgccgcctacaagaagctctcctcggccgcc
gccgggaacctggccagctcgcccgagcacctgaagtccgggttcgacctggacgtcgag
tggtggatcaagaacgaggcggccgtgtccaagcgctggcaggagtgggtcaatgcctga
DBGET
integrated database retrieval system
