Solicola gregarius: L0C25_03220
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Entry
L0C25_03220 CDS
T09807
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sgrg
Solicola gregarius
Pathway
sgrg03420
Nucleotide excision repair
sgrg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sgrg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
L0C25_03220
03430 Mismatch repair
L0C25_03220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgrg03400
]
L0C25_03220
Enzymes [BR:
sgrg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L0C25_03220
DNA repair and recombination proteins [BR:
sgrg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
L0C25_03220
MMR (mismatch excision repair)
Other MMR factors
L0C25_03220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
UYM06097
UniProt:
A0AA46TIR5
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All DBs
Position
complement(639779..641869)
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AA seq
696 aa
AA seq
DB search
MSPTADELLDALDPEQRDVALALRGPVCVLAGAGTGKTRAITHRIAYGVASGVFKPTEVL
AVTFTNRAAGEMRGRLRALGADGVQARTFHSAALRQARYFWPKVYGGELPELTASKIPML
SEAVRRCRVDADSALLRDLAAEVEWAKVSNVRPDDYVRLAPEFARSVAGLDAATTARVFG
AYEQVKRDRGRIDMEDILLCTAAILTDDAGVAAQVRAQYRWLVVDEFQDVNPLQSALLDL
WLGDRDDICVVGDPLQTIYSFAGASPDYLTGFGRRHPSAQTIELTRNYRSTPQIVAAANS
VFATRARREGVVLRAQCDDGPQVEYAGHPDEVAEAEAIAERIDKLHTAGTPLREMAVLFR
INAQSEAYEEALASREIPYVVRGVERFFERAEVKQAITLLRGAARAGGEESGELVADVVA
ILSAMGYTAQAPATAGSVRDRWESLNAVVTMAIEYAESATDAGLTELVADLERRAQTAHA
PVAEGVTLATLHSAKGLEWDAVFCVGVHEGTMPITYAEAPQEIEEERRLFYVGMTRARHL
LAISWSAARAPGGRGGRRPSRFLDPLLPRDAAAQSRVSRTTRKSRSERRGVARCRSCNGL
LDSAAERKIGRCSQCPPTYDEELFEELRTWRLERAAAQKVPAFCVFTDATLVAIAESLPA
ESVALARIPGIGKTKIDRFGDDVLAIIKKSAKNPEK
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaccgaccgccgacgagctgctcgacgcgctcgacccggagcaacgcgacgtcgca
ctcgccctgcgcggcccggtgtgcgtgctcgccggtgccggcacgggcaagacgcgtgcc
atcacgcaccgcatcgcgtacggcgttgcatcgggcgtgttcaagccgaccgaggtgctc
gcggtcaccttcaccaaccgcgccgccggcgagatgcgcgggcggctgcgcgcgctcggc
gccgacggcgtgcaggcgcgtacgttccactccgccgccctgcggcaggcccgctacttc
tggccgaaggtgtacggcggcgagctcccggagctgaccgcgtcgaagatcccgatgctc
agcgaggccgtgcgccgatgtcgggtcgacgccgactccgcgctgctccgcgacctcgcc
gcggaggtcgagtgggcgaaggtgagcaacgtccgtcccgatgactacgtgcggctcgcg
cccgagttcgcccgctcggtcgcgggcctcgacgccgcaaccacggcacgggtcttcggc
gcgtacgagcaggtgaagcgcgaccgcggccgcatcgacatggaagacatcctgctctgc
actgcggcgattctcaccgacgacgccggcgtcgccgcgcaggtacgcgcgcagtaccgc
tggctggtcgtcgacgagttccaggacgtcaacccgctccagtcggccctgctcgacctg
tggctcggtgaccgtgacgacatctgtgtcgtcggagacccgttgcagacgatctactcg
ttcgcgggcgcctcacccgactacctgaccgggttcggccgacgccaccccagcgcccag
accatcgagctcacccgaaactaccgctcgactccgcagatcgtggcggccgcgaactcc
gtgttcgccacccgcgcacgccgcgagggcgtcgtgctgcgcgctcagtgcgacgacggg
ccacaggtcgagtacgccggccaccccgacgaggttgccgaggcggaggcgatcgccgaa
cgcatcgacaagctgcacacggcgggcacgcccctgcgcgagatggccgtcctgttccgc
atcaacgcccagtccgaggcgtacgaggaggcgctcgcctcccgcgagatcccgtacgtc
gtgcgcggcgtcgagcggttcttcgagcgggccgaggtcaagcaggcgatcaccctgctg
cgcggcgccgcgcgggcgggcggcgaggagagcggcgagctggtcgccgatgtggtcgcg
atcctctcggccatgggttacaccgcgcaggcaccggcgaccgcagggtcggtccgcgat
cgctgggagtcgctcaatgcagtggtcacgatggcgatcgagtacgccgagtccgcaacc
gacgccgggctcaccgagctcgtcgccgacctcgaacgccgtgcgcagaccgcccacgca
cccgtcgccgagggcgtgacgcttgcgacgctgcactccgccaaggggctcgagtgggac
gccgtcttctgcgtcggagtccacgagggcacgatgccgatcacgtacgccgaggcgccc
caggagatcgaggaggagcgccggctgttctacgtcgggatgacccgtgcgcgacacctg
ctcgcgatctcctggtcggccgcgcgtgcgccgggcggacgaggaggccgtcgcccgagc
aggttcctcgatccgctgctgccacgtgatgctgccgcgcagtcgcgggtctcgcgtacg
acgcgcaaatcccgctccgagcggcgcggcgtcgcgcgatgccgatcgtgcaacggcctg
ctcgactccgccgccgagcgcaagatcgggcgatgctcgcaatgcccaccgacgtacgac
gaggagctcttcgaggagctgcgtacgtggcgtctggaacgcgccgctgcgcagaaggtc
ccggcgttctgcgtcttcaccgatgccaccctcgtcgcgatcgcggagtcgctgccggcc
gagagcgtcgcgctcgctcgcataccgggcatcggaaagacgaagatcgaccggttcggc
gacgacgtactggccatcatcaagaaatctgcaaagaatcccgaaaaatag
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