Solicola gregarius: L0C25_06575
Help
Entry
L0C25_06575 CDS
T09807
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
sgrg
Solicola gregarius
Pathway
sgrg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sgrg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
L0C25_06575
09124 Replication and repair
03420 Nucleotide excision repair
L0C25_06575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgrg03021
]
L0C25_06575
03400 DNA repair and recombination proteins [BR:
sgrg03400
]
L0C25_06575
Enzymes [BR:
sgrg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L0C25_06575
Transcription machinery [BR:
sgrg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
L0C25_06575
DNA repair and recombination proteins [BR:
sgrg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
L0C25_06575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
UYM06731
UniProt:
A0AA46YMQ1
LinkDB
All DBs
Position
1313662..1315299
Genome browser
AA seq
545 aa
AA seq
DB search
MSCLIVQSDKSLLLEVDHEQSAACRRAIAPFAELERAPEHIHTYRITPLGLWNARAAGHD
AEQVVDTLMEYSRYPVPHALLVDVAETMSRYGRLRLEKHPTHHLVLATTDRPVLEEVMRH
KRIAPMLGDRIDDETVAVHPSERGQLKQALLKVGWPAEDLAGYVDGEHHAIELAEDGWSL
RPYQQEAVESFWHGGSGVVVLPCGAGKTLVGAGAMAEAKATTLILVTNTVAARQWKDELV
RRTSLTADEIGEYSGTRKEIRPVTIATYQVMTTRRKGTYTHLELFDARDWGLVVYDEVHL
LPAPIFRMTADLQARRRLGLTATLVREDGHENDVFSLIGPKRYDAPWKDIEQQGYIAPAD
CLEVRVTLSDGERIAYATAEPDVRYRLASSTDRKTAVVEELVERHRGDPTLVIGQYIDQL
DDLAERLGAPVIKGETSVKERERLFTAFREGELDLLVVSKVANFSVDLPEASVAIQVSGA
FGSRQEEAQRLGRLLRPKEDGRSAHFYAIVSRDTVDADFAQHRQRFLAEQGYAYNIVDAE
DLSSR
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
gtgtcctgcttgatcgtccagtccgacaagtcgctactgctcgaggtcgaccacgagcag
agcgcggcttgccgccgggcaattgctccgttcgccgagctcgagcgcgcgcccgaacac
atccacacctaccgcatcacgccactcggcctctggaacgcgcgcgccgccggtcacgac
gccgagcaggtcgtcgacaccctgatggagtactcgcgataccccgtcccccatgccctg
ctcgtcgacgtcgccgagacgatgtcgcggtacggccggctgcgactcgagaagcatccg
acgcaccacctggtactcgcgacgaccgatcgtcccgtgctcgaagaggtcatgcgacac
aagcgcatcgcgccgatgctcggcgaccgcatcgacgacgagaccgtggccgtacacccg
tcggagcgaggccagctcaagcaggcactgctgaaggtcggctggccggccgaggacctc
gccgggtacgtcgacggcgagcaccatgcgatcgagctggccgaggacggctggtcgctg
cggccgtaccagcaggaggccgtcgagtcgttctggcacggcgggtccggcgtcgtcgta
ctcccctgtggcgcgggcaagacgcttgtcggcgcgggcgcgatggcggaggccaaggcg
accacgctgatcctggtcaccaacacggtcgccgcgcggcagtggaaggacgagctcgtc
cgccgcacgtcgctgacggcagacgagatcggcgagtactccggcacccgcaaggagatc
cggcccgtcacgatcgcgacgtaccaggtgatgacgacgcggcggaagggcacgtacacc
catctcgagctgttcgacgcgcgcgactggggcctggtcgtgtacgacgaggtgcacctg
ctcccggcgccgatcttccggatgaccgccgacctgcaggcgcggcggcgcctcggactc
accgcgacgctcgtccgcgaggacggtcacgagaacgacgtgttcagtctgatcgggccg
aagcggtacgacgcaccgtggaaggacatcgagcagcagggctacatcgcgcccgccgac
tgcctcgaggtgcgcgtgacgctcagcgacggcgagcgcatcgcatacgccaccgccgag
ccggacgtgcgctaccggctcgcgtcctcgacggatcgcaagacggcggtcgtcgaggag
ctggtcgaacgtcaccgtggcgatccgacgctggtgatcgggcagtacatcgaccagctc
gacgacctggccgagcgcctcggtgcgcccgtgatcaagggcgagacgagcgtcaaggag
cgcgagcggctgttcacggcgttccgggagggggagctcgatctgctcgtcgtcagcaag
gtggcgaacttctcggtcgacctccccgaggcgagcgtggcgatccaggtgtcgggagcg
ttcgggtcgcgccaggaggaggcgcagcggctcggcaggctactgcggcccaaggaggac
ggccgttcggcgcacttctacgccatcgtctcgcgagacaccgtcgacgccgacttcgcc
cagcaccgacagcgtttcctcgccgagcaggggtacgcgtacaacatcgtcgacgccgaa
gacctctcctcccgctga
DBGET
integrated database retrieval system
