KEGG   Solicola gregarius: L0C25_18605
Entry
L0C25_18605       CDS       T09807                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
sgrg  Solicola gregarius
Pathway
sgrg03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sgrg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    L0C25_18605
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sgrg03019]
    L0C25_18605
Messenger RNA biogenesis [BR:sgrg03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     L0C25_18605
Motif
Pfam: RNase_J_C Lactamase_B RMMBL Lactamase_B_2 eIF-1a
Other DBs
NCBI-ProteinID: UYM04524
UniProt: A0AA46TFS0
LinkDB
Position
3801114..3802805
AA seq 563 aa
MSHTHPELGAPPALQPGALRVTPLGGLGEIGRNMTVFEYDGKLLVVDCGVLFPEDHQPGV
DLILPDFESIRDRLDDIVGIVLTHGHEDHIGGVPYLLRERGDIPVIGSKLTLALVDSKLR
EHRLKDIPHYVVAAGDIEGFAPFECEFVAVNHSIPDALAVAIRTPAGTVVHTGDFKMDQL
PLDGRITDLRAFARLGEAGVDLLLSDSTNSDVPGFTTTEREITPVLDRVFAASEQRIIVA
CFASHIHRVQQVLNAAVEHGRKVAYIGRSMVRNMAIARDLGYLQVPDGVLVDGRAIEDYR
PDELVLVSTGSQGEPMSALARIANRDHDKVRIEPGDTVVLASSMIPGNENAVYRVINGLT
RLGARVVHKGNALVHVSGHASAGELLYLYNIVRPDNVMPVHGETRHLHANAALAAATGVP
AERVLIGEDGMVVDLRDGVARIVGQVDCGYVYVDGSTVGDITDSELKDRRILGEEGFISV
IVVIDSTTGKIVSGPQIQARGFAEDDSVFNDIRPRLEEALELAVRDGVRDTYQLQQTIRR
TIGRWVSGAHRRRPMIVPIVIEA
NT seq 1692 nt   +upstreamnt  +downstreamnt
atgagtcacacccaccccgagctcggcgcaccgccggcgctccagcccggcgccttgcgc
gtcaccccgctcggcgggctcggcgagatcggtcgcaacatgaccgtgttcgagtacgac
ggcaagctgctcgtggtcgactgcggcgtgctgttccccgaggatcaccagccgggcgtc
gacctgatcctgccggacttcgagtcgatccgagaccggctcgacgacatcgtcggcatc
gtgttgacgcatggccacgaggatcacatcggcggcgttccgtacctcttgcgcgagcgc
ggcgacatcccggtcatcggctccaagctcacgttggcgctggtcgactccaagctgcgc
gagcaccggctcaaggacatcccgcactacgtcgtcgcggccggtgacatcgagggcttc
gctccgttcgagtgcgagttcgtcgccgtgaaccactccatcccggacgcattggcagtc
gcgatccgtacgcccgccggaaccgtcgtgcacacgggcgacttcaagatggaccagctg
ccgctcgacgggcgcatcaccgacctgcgcgcgttcgcccggctcggcgaggcgggcgtc
gacctgttgttgtccgactcgacgaactccgacgtgcccgggttcacgacgaccgagcgc
gagatcacgccggtcctcgaccgggtgttcgccgcgtcggagcagcggatcatcgtggcc
tgcttcgcctcgcacatccaccgcgtgcagcaggtgctgaacgccgccgtcgagcatggt
cggaaggtcgcttacatcggccgctcgatggtgcgcaacatggcgatcgcgcgcgatctg
gggtacctgcaggtgcccgacggtgtgctcgttgacggccgcgcgatcgaggactaccgt
cccgacgagctcgtcctggtctcgaccggctcgcagggcgagccgatgtcggcacttgcg
cggatcgccaaccgtgaccacgacaaggtccgcatcgagcccggcgacaccgtcgtgctc
gcgtcgtcgatgatccccggcaacgagaacgccgtgtatcgcgtcatcaacggactcacc
aggcttggcgcgcgggtcgtacacaagggcaacgccctggtgcacgtctcgggacacgcg
tcggcgggggagctcctctacctctacaacatcgtgcgaccggacaacgtgatgcccgtc
cacggtgagacgcggcacctgcacgcgaacgccgcgctcgcggccgccaccggggtgccg
gccgaacgggtgctcatcggcgaggacggcatggtggtcgaccttcgcgacggcgtcgcc
cggatcgtcggccaggtcgactgcggctacgtctacgtcgacggttcgacggtcggcgac
atcacggactccgagctgaaggaccgccggatcctcggcgaggagggcttcatctcggtc
atcgtcgtgatcgactcgacgaccggcaagatcgtcagtggtccgcagatccaggcccgc
gggttcgccgaggacgactccgtcttcaacgacatccggccacgcctggaggaggccctc
gagctcgccgtccgcgacggggtgcgcgatacgtaccagctgcagcagacgattcgccgc
acgatcggccgctgggtcagcggcgcgcatcggcgtcgcccgatgatcgtgcccatcgtg
atcgaggcctga

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