Solicola gregarius: L0C25_18635
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Entry
L0C25_18635 CDS
T09807
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
sgrg
Solicola gregarius
Brite
KEGG Orthology (KO) [BR:
sgrg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sgrg03009
]
L0C25_18635 (rimO)
Enzymes [BR:
sgrg01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
L0C25_18635 (rimO)
Ribosome biogenesis [BR:
sgrg03009
]
Prokaryotic type
ribosomal protein modification factors
L0C25_18635 (rimO)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
UYM04530
UniProt:
A0AA46YJG8
LinkDB
All DBs
Position
3812169..3813632
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AA seq
487 aa
AA seq
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MSSDTDPTTVALVTLGCARNEVDSEELAGRLQRDGFRLVADASDAEAVVVNTCGFVESAK
KDSVDTLLQAAELKGDGRTKSVVAVGCMAERYGSELADSLSEADAVLGFDDYPDIAGRLR
SIVAGERHEPHVPVDRRTLLPISPVERAGADVVVPGHAPAQPDLPEGLAPASGPRIVRTR
LDDSPTAPLKIASGCDRRCTFCAIPAFRGSFVSRRPSDVLADARWLGANGARELFLVSEN
STSYGKDLGDLRLLETLLPELAAVEGVERVRVSYLQPAETRPSLVEAMTSTPGVLPYFDL
SFQHASGPLLRRMRRFGDAERFLELLGTIRDRAPAAGVRSNVIVGFPGETEDDLETLCDF
LVEARLDATGVFGYSDEDGTEAASLDEKLDPDEIADRVEHVSRLVEELTDQRAADRHGEF
VSVLVESVDGDVVGRAEHQGPEVDGCTLLRDSTVGGRALDVQPGATVTGRVVANDGVDLI
ADVVQVS
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcgataccgatcccaccaccgttgcgctggtcaccctcgggtgcgcgcgcaat
gaggtcgactccgaggagctcgccggccggctccagcgcgacggcttccggctggtcgcg
gatgcctccgacgccgaggcggtcgtcgtcaacacctgcgggttcgtggagtcggcgaag
aaggactccgtcgacacgctgctgcaggccgccgagctgaagggcgacgggcgcacgaag
tccgtcgtcgcggtcggctgcatggccgagcggtacggcagtgagctcgccgactcgctg
tcggaggccgatgccgtgctcggcttcgacgactatcccgacatcgccggacggctgcgc
agcatcgtcgcgggggagcggcacgagccgcacgtacccgtcgaccggcgcaccctgctg
ccgatcagcccggtcgagcgcgccggcgccgacgtcgtggtccccgggcacgcgccggca
cagcccgaccttccggagggcctcgcccccgcgtccggaccgcgcatcgtacgcacgcgg
ctcgacgactcaccgaccgcgccgttgaagatcgcgtccggttgtgaccggcgctgcacg
ttctgcgccatcccggcgtttcgcggctccttcgtctctcgccgcccgtccgacgtactc
gcggatgcgcggtggctcggcgcgaacggcgcccgggagctgttcctggtcagcgagaac
tccacctcgtacggcaaggatctcggcgacctgcgcctcctcgagacgctgctgccggag
ctggcggccgtcgagggcgtcgagcgcgtacgcgtctcgtacctgcagcccgccgagacc
cgcccctcactcgtcgaggcgatgacgagtacgcccggagtcctgccgtacttcgacctg
tcgttccaacacgcgtccggtccgctgcttcggcgcatgcgccgtttcggtgacgccgag
cgcttcctcgagctgcttggcacgattcgcgaccgggcgcccgcggcgggcgtacgcagc
aacgtcatcgtcggcttcccgggcgagaccgaagacgatctcgagacgctgtgcgacttc
ctggtggaggcccgcctcgatgcgaccggcgtcttcggctactccgacgaggacggcacg
gaggccgcgagcctcgacgagaagctcgatcccgatgagatcgccgatcgcgtcgagcac
gtcagcaggctggtcgaggagctgaccgaccaacgggccgccgaccggcatggcgagttc
gtctccgttctcgtcgagtcggtcgacggcgacgtcgtcggacgtgccgagcatcagggg
cccgaggtcgacggttgtacgctgctgcgcgatagtacggtcggcggccgtgcactcgac
gtccagccgggcgcgacggtgacggggcgcgtcgtcgccaacgacggggtagacctgatc
gccgacgtagtgcaggtgagctga
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