Solicola gregarius: L0C25_19580
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Entry
L0C25_19580 CDS
T09807
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
sgrg
Solicola gregarius
Pathway
sgrg03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sgrg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
L0C25_19580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgrg03400
]
L0C25_19580
DNA repair and recombination proteins [BR:
sgrg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
L0C25_19580
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
UYM04714
UniProt:
A0AA46TH34
LinkDB
All DBs
Position
complement(4022960..4023883)
Genome browser
AA seq
307 aa
AA seq
DB search
MRAMWKGSVSFGLVNIPIKMYVATHQHDVSFKQVRRTDGSRVRYRRVAETDGEEVAYGDI
AKGYELDDGSMVVLTDDDFAELPLPTKRTIEVLEFVPLDQLDPVYFNKSYYLEPEGAPGL
KPYVLLREALNDSEMVAIVKITISTREQLAALRVREDVLVLSTMLWPDELRAADFDFLDQ
DVSIRAQEQAMANSLVTSMSGDFDPSEYTDDFADALKSMIDAKLEGGEVTPAASTGDEPG
DNVVDLMSALQASVDRASSGAESDDEKPETKAASTKKATKKTTKKSSTKKSTAKKATKKA
SAGRRSA
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgcgatgtggaagggctcggtctcgttcggcctggtcaacatcccgatcaagatg
tacgtcgcgacccatcagcacgacgtgtcgttcaagcaggtacgtcgaaccgatggctcc
cgcgtccgctaccgtcgcgtcgccgagaccgacggcgaggaggtcgcgtacggcgacata
gccaagggctacgagctcgacgacgggtcgatggtggtgctgaccgacgacgacttcgcc
gagctgccgctgccgacgaagcgcacgatcgaggtgctcgagttcgtacctctcgaccag
ctcgacccggtctacttcaacaagtcgtactatctcgagcccgagggcgcccccggcctc
aagccgtacgtgttgctgcgcgaggccctcaacgacagcgagatggtcgcgatcgtgaag
atcacgatcagcacccgcgagcagcttgccgcgctccgcgtacgcgaggacgtcctggtg
ctctcgacgatgctctggcccgatgagctgcgcgccgcggacttcgacttcctcgaccag
gacgtctcgatccgcgcgcaggagcaggcgatggccaactccctcgtcacctcgatgtcg
ggcgacttcgacccgtccgagtacaccgacgacttcgccgacgcgctcaagtcgatgatc
gacgcgaagctcgaaggcggcgaggtcacgcccgccgcgtccaccggagacgagccaggc
gacaacgtcgtcgacctgatgtctgccctgcaggcgtcggtcgaccgggcctcgtccggc
gccgagtccgacgacgagaagcccgagacgaaggccgcctcgacgaagaaggccaccaag
aagaccacgaagaagtcgtccaccaagaagtccacggccaagaaggcgacgaagaaggcg
tcggccggtcgacgcagcgcctga
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