Solicola gregarius: L0C25_19840
Help
Entry
L0C25_19840 CDS
T09807
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
sgrg
Solicola gregarius
Brite
KEGG Orthology (KO) [BR:
sgrg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sgrg03016
]
L0C25_19840
Enzymes [BR:
sgrg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
L0C25_19840
Transfer RNA biogenesis [BR:
sgrg03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
L0C25_19840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
UYM04764
UniProt:
A0AA46TG67
LinkDB
All DBs
Position
complement(4079829..4081076)
Genome browser
AA seq
415 aa
AA seq
DB search
MSSEHSAPGDHDDASPPEESLPPLRLREPLPPVVDSDDAFSSTLAAIGEGEGPVAFDAER
ASGYRYSARAYLVQLRRRGSGTHLVDPIAFDDLTALDAVVGDTEWILHAATQDLPCLRDI
GLVPRRLFDTELAGRLLNLPRVGLASLVQTLLGYTLAKEHSAADWSKRPLPEPWLEYAAL
DVEVLSELRDEIDRRLVESGKREWAEQEFDALLDFTGPAPREEPWRRTSGIHRARGRRQL
ALVRSLWDARDQIAASRDIAPGRVLPDSSIVAMAAAQPRDRATLRAMPVMRNRSARRHLD
EWVDAVGAALALPDRDLPTVAARYNGPPPARAWSEKFPVAAARLGACREVVTQIAEDHDL
PAENLLAPDTVRRVAWEPPEPATADAVAAALAGHGARQWQIDLTGPGLAAALDTE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgagttccgagcactcggcgccgggcgaccacgacgacgcctccccgcccgaggagagc
ctgccgcccctgcgactccgcgaaccccttccgccggtcgtcgacagcgacgacgcattc
tcctcgacacttgccgcgatcggtgagggcgaagggccggtcgcgttcgatgccgagcgc
gcatccggctatcgctactccgcacgggcgtacctcgtgcagctgcgcaggcgcggctcg
ggtacgcatctcgtcgacccgatcgccttcgacgacctcaccgcactggatgccgtcgtc
ggcgacaccgagtggatcctgcacgcggcgacccaggacctcccctgcctccgcgatatc
gggctcgtgccccggcggctgttcgacaccgagctcgcgggtcggctgctcaacctcccc
cgtgtcggtctcgcctcgctcgtgcagaccctgctgggctacaccctcgccaaggaacac
tccgcagccgactggtcgaagcgccctcttcccgagccgtggctcgagtacgccgcgctc
gacgtcgaggtgctgtccgagctccgcgacgagatcgaccggcgcctcgtcgagtccggc
aagcgtgagtgggccgagcaggagttcgacgcactgctcgacttcaccggccctgcgccg
agggaggagccgtggcggcgtacgtcggggatccaccgtgcgcgcgggcgacgccagctc
gcgctcgtacgctccctgtgggacgcccgtgaccagatcgccgcctcgcgcgacatcgcg
cccggacgggtgcttcccgattcgtcgatcgttgcgatggccgctgcccagccgcgcgat
cgggcgacgctgcgcgcgatgccggtgatgcggaaccggtcggcgcgtcgccacctcgac
gagtgggtcgacgccgtcggcgccgcactcgcgttgcccgaccgcgacctgccgacggtc
gcggctcggtacaacggtccgccgccggctcgggcgtggagcgagaagttcccggtcgca
gcggcccgcctcggcgcctgccgcgaggtcgtcacgcagatcgccgaggaccacgacctc
ccggcggagaacctcctcgcgcccgacacggtgcgccgggtggcctgggaaccacccgag
cccgcaacggccgacgcggtcgccgctgcgctcgccggccacggtgcgcgccaatggcag
atcgacctcaccggacccggcctcgccgcggcgctcgataccgagtaa
DBGET
integrated database retrieval system
